Guide to the Human Genome
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Name: L3MBTL4 Sequence: fasta or formatted (623aa) NCBI GI: 158138528
Description:

l(3)mbt-like 4

Referenced in:

Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         36           3
 C cysteine            2.7         17           1
 D aspartate           6.7         42           2
 E glutamate           6.6         41           3
 F phenylalanine       3.5         22           1
 G glycine             5.8         36           1
 H histidine           4.0         25           2
 I isoleucine          3.7         23           1
 K lysine              7.7         48           2
 L leucine             8.8         55           3
 M methionine          1.9         12           1
 N asparagine          3.9         24           1
 P proline             6.4         40           1
 Q glutamine           5.1         32           2
 R arginine            5.5         34           1
 S serine              6.3         39           2
 T threonine           3.0         19           2
 V valine              7.5         47           2
 W tryptophan          2.2         14           1
 Y tyrosine            2.7         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   l(3)mbt-like 4 
L3MBTL3               0.482   l(3)mbt-like 3 isoform b 
L3MBTL3               0.482   l(3)mbt-like 3 isoform a 
L3MBTL                0.422   l(3)mbt-like isoform I 
L3MBTL                0.422   l(3)mbt-like isoform II 
L3MBTL2               0.126   l(3)mbt-like 2 
MBTD1                 0.119   mbt domain containing 1 
SCML2                 0.118   sex comb on midleg-like 2 
SCMH1                 0.106   sex comb on midleg 1 isoform 1 
SCMH1                 0.093   sex comb on midleg 1 isoform 2 
SFMBT1                0.085   Scm-like with four mbt domains 1 
SFMBT1                0.085   Scm-like with four mbt domains 1 
SFMBT1                0.085   Scm-like with four mbt domains 1 
SFMBT2                0.081   Scm-like with four mbt domains 2 
PHC2                  0.038   polyhomeotic-like 2 isoform b 
PHC2                  0.038   polyhomeotic-like 2 isoform a 
PHC1                  0.035   polyhomeotic 1-like 
PHC3                  0.030   polyhomeotic like 3 
SAMD7                 0.030   sterile alpha motif domain containing 7 
SAMD11                0.029   sterile alpha motif domain containing 11 
SAMD13                0.026   sterile alpha motif domain containing 13 isoform 2 ...
SAMD13                0.026   sterile alpha motif domain containing 13 isoform 2 ...
SAMD13                0.026   sterile alpha motif domain containing 13 isoform 1 [...
SAMD1                 0.025   sterile alpha motif domain containing 1 
SCML4                 0.019   sex comb on midleg-like 4 
MYT1                  0.017   myelin transcription factor 1 
ST18                  0.017   suppression of tumorigenicity 18 
MYT1L                 0.015   myelin transcription factor 1-like 
PHF20                 0.015   PHD finger protein 20 
PHF20L1               0.012   PHD finger protein 20-like 1 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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