Guide to the Human Genome
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Name: L3MBTL3 Sequence: fasta or formatted (755aa) NCBI GI: 55770872
Description:

l(3)mbt-like 3 isoform b

Referenced in:

Additional Genes in Development

Other entries for this name:
alt prot [780aa] l(3)mbt-like 3 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         46           2
 C cysteine            3.0         23           2
 D aspartate           6.8         51           2
 E glutamate           8.9         67           3
 F phenylalanine       4.5         34           1
 G glycine             5.8         44           2
 H histidine           3.3         25           1
 I isoleucine          3.4         26           1
 K lysine              8.9         67           3
 L leucine             6.0         45           2
 M methionine          2.3         17           1
 N asparagine          4.1         31           2
 P proline             6.6         50           2
 Q glutamine           3.3         25           2
 R arginine            4.8         36           2
 S serine              7.0         53           4
 T threonine           4.4         33           3
 V valine              6.5         49           2
 W tryptophan          2.1         16           1
 Y tyrosine            2.3         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   l(3)mbt-like 3 isoform b 
L3MBTL3               0.992   l(3)mbt-like 3 isoform a 
L3MBTL4               0.395   l(3)mbt-like 4 
L3MBTL                0.349   l(3)mbt-like isoform I 
L3MBTL                0.349   l(3)mbt-like isoform II 
L3MBTL2               0.100   l(3)mbt-like 2 
MBTD1                 0.100   mbt domain containing 1 
SCML2                 0.093   sex comb on midleg-like 2 
SCMH1                 0.088   sex comb on midleg 1 isoform 1 
SCMH1                 0.081   sex comb on midleg 1 isoform 2 
SFMBT2                0.072   Scm-like with four mbt domains 2 
SFMBT1                0.072   Scm-like with four mbt domains 1 
SFMBT1                0.072   Scm-like with four mbt domains 1 
SFMBT1                0.072   Scm-like with four mbt domains 1 
PHC2                  0.031   polyhomeotic-like 2 isoform b 
PHC2                  0.031   polyhomeotic-like 2 isoform a 
PHC1                  0.029   polyhomeotic 1-like 
SAMD7                 0.029   sterile alpha motif domain containing 7 
PHC3                  0.026   polyhomeotic like 3 
SAMD11                0.024   sterile alpha motif domain containing 11 
SAMD13                0.017   sterile alpha motif domain containing 13 isoform 2 ...
SAMD13                0.017   sterile alpha motif domain containing 13 isoform 2 ...
SAMD13                0.017   sterile alpha motif domain containing 13 isoform 1 [...
SAMD1                 0.016   sterile alpha motif domain containing 1 
SCML4                 0.012   sex comb on midleg-like 4 
MYT1L                 0.010   myelin transcription factor 1-like 
LOC100294088          0.010   PREDICTED: hypothetical protein, partial 
PHF20                 0.010   PHD finger protein 20 
DNMT1                 0.009   DNA (cytosine-5-)-methyltransferase 1 isoform a [Ho...
DNMT1                 0.009   DNA (cytosine-5-)-methyltransferase 1 isoform b [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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