PRAGMIN 6421

Name: PRAGMIN	Sequence: fasta or formatted (1402aa)		NCBI GI: 157909822
Description: pragmin		Referenced in: Additional Serine / Threonine Protein Kinases
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.6 120 4 C cysteine 3.4 48 2 D aspartate 3.8 53 2 E glutamate 6.4 90 5 F phenylalanine 2.6 36 2 G glycine 8.1 113 2 H histidine 3.1 43 2 I isoleucine 2.3 32 2 K lysine 5.1 72 2 L leucine 8.0 112 3 M methionine 1.1 15 3 N asparagine 2.3 32 2 P proline 11.4 160 6 Q glutamine 5.3 74 2 R arginine 4.7 66 3 S serine 12.9 181 3 T threonine 4.1 58 2 V valine 4.3 60 3 W tryptophan 1.1 16 1 Y tyrosine 1.5 21 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 pragmin SGK269 0.136 NKF3 kinase family member C19orf35 0.026 hypothetical protein LOC374872 NACA 0.017 nascent polypeptide-associated complex alpha subuni... PINK1 0.013 PTEN induced putative kinase 1 precursor SRRM2 0.012 splicing coactivator subunit SRm300 ZNF469 0.012 zinc finger protein 469 TAF4 0.011 TBP-associated factor 4 SHANK1 0.011 SH3 and multiple ankyrin repeat domains 1 TCOF1 0.009 Treacher Collins-Franceschetti syndrome 1 isoform c ... TNRC18 0.009 trinucleotide repeat containing 18 MUC12 0.009 PREDICTED: mucin 12 TCOF1 0.009 Treacher Collins-Franceschetti syndrome 1 isoform f... TCOF1 0.009 Treacher Collins-Franceschetti syndrome 1 isoform e... TCOF1 0.009 Treacher Collins-Franceschetti syndrome 1 isoform d... TCOF1 0.009 Treacher Collins-Franceschetti syndrome 1 isoform b ... TCOF1 0.009 Treacher Collins-Franceschetti syndrome 1 isoform a ... FLJ22184 0.009 PREDICTED: hypothetical protein FLJ22184 ARID1A 0.009 AT rich interactive domain 1A isoform a ARID1A 0.009 AT rich interactive domain 1A isoform b FLJ22184 0.008 PREDICTED: hypothetical protein LOC80164 MUC12 0.008 PREDICTED: mucin 12, cell surface associated ADAMTS7 0.008 ADAM metallopeptidase with thrombospondin type 1 mot... MAP4K4 0.008 mitogen-activated protein kinase kinase kinase kinas... PCLO 0.008 piccolo isoform 2 PCLO 0.008 piccolo isoform 1 MAST4 0.008 microtubule associated serine/threonine kinase fami... CNOT3 0.008 CCR4-NOT transcription complex, subunit 3 POM121C 0.008 POM121 membrane glycoprotein (rat)-like COL14A1 0.008 collagen, type XIV, alpha 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.