SAMD13 33573

Name: SAMD13	Sequence: fasta or formatted (116aa)		NCBI GI: 58293756
Description: sterile alpha motif domain containing 13 isoform 1		Referenced in: Additional Interaction Domain Families
Other entries for this name: alt prot [102aa] sterile alpha motif domain containing 13 isoform 2 alt prot [102aa] sterile alpha motif domain containing 13 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.2 6 1 C cysteine 0.9 1 1 D aspartate 5.2 6 1 E glutamate 8.6 10 2 F phenylalanine 2.6 3 1 G glycine 6.9 8 1 H histidine 1.7 2 1 I isoleucine 1.7 2 1 K lysine 7.8 9 1 L leucine 10.3 12 3 M methionine 5.2 6 1 N asparagine 6.9 8 2 P proline 6.0 7 2 Q glutamine 4.3 5 1 R arginine 3.4 4 1 S serine 6.9 8 2 T threonine 3.4 4 1 V valine 9.5 11 2 W tryptophan 0.9 1 1 Y tyrosine 2.6 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sterile alpha motif domain containing 13 isoform 1 [... SAMD13 0.863 sterile alpha motif domain containing 13 isoform 2 ... SAMD13 0.863 sterile alpha motif domain containing 13 isoform 2 ... SAMD1 0.417 sterile alpha motif domain containing 1 PHC2 0.166 polyhomeotic-like 2 isoform b PHC2 0.166 polyhomeotic-like 2 isoform a L3MBTL4 0.156 l(3)mbt-like 4 SFMBT2 0.147 Scm-like with four mbt domains 2 SFMBT1 0.137 Scm-like with four mbt domains 1 SFMBT1 0.137 Scm-like with four mbt domains 1 SFMBT1 0.137 Scm-like with four mbt domains 1 SCMH1 0.128 sex comb on midleg 1 isoform 1 SCMH1 0.128 sex comb on midleg 1 isoform 2 PHC1 0.128 polyhomeotic 1-like L3MBTL3 0.128 l(3)mbt-like 3 isoform b L3MBTL3 0.128 l(3)mbt-like 3 isoform a SAMD11 0.128 sterile alpha motif domain containing 11 PHC3 0.118 polyhomeotic like 3 SCML2 0.109 sex comb on midleg-like 2 SCML4 0.104 sex comb on midleg-like 4 SAMD7 0.090 sterile alpha motif domain containing 7 SARM1 0.085 sterile alpha and TIR motif containing 1 SCML1 0.076 sex comb on midleg-like 1 isoform a SCML1 0.076 sex comb on midleg-like 1 isoform c SCML1 0.076 sex comb on midleg-like 1 isoform c SCML1 0.076 sex comb on midleg-like 1 isoform b WDSUB1 0.028 WD repeat, sterile alpha motif and U-box domain con... WDSUB1 0.028 WD repeat, sterile alpha motif and U-box domain con... WDSUB1 0.028 WD repeat, sterile alpha motif and U-box domain con... SEC23IP 0.024 Sec23-interacting protein p125 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.