SAMD13 11533

Name: SAMD13	Sequence: fasta or formatted (102aa)		NCBI GI: 197927257
Description: sterile alpha motif domain containing 13 isoform 2		Referenced in: Additional Interaction Domain Families
Other entries for this name: alt mRNA [102aa] sterile alpha motif domain containing 13 isoform 2 alt prot [116aa] sterile alpha motif domain containing 13 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.9 5 1 C cysteine 0.0 0 0 D aspartate 5.9 6 1 E glutamate 7.8 8 2 F phenylalanine 2.9 3 1 G glycine 6.9 7 1 H histidine 2.0 2 1 I isoleucine 2.0 2 1 K lysine 7.8 8 1 L leucine 10.8 11 3 M methionine 4.9 5 1 N asparagine 7.8 8 2 P proline 4.9 5 2 Q glutamine 4.9 5 1 R arginine 2.9 3 1 S serine 6.9 7 2 T threonine 3.9 4 1 V valine 8.8 9 2 W tryptophan 1.0 1 1 Y tyrosine 2.9 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sterile alpha motif domain containing 13 isoform 2 ... SAMD13 1.000 sterile alpha motif domain containing 13 isoform 2 ... SAMD13 1.000 sterile alpha motif domain containing 13 isoform 1 [... SAMD1 0.484 sterile alpha motif domain containing 1 PHC2 0.192 polyhomeotic-like 2 isoform b PHC2 0.192 polyhomeotic-like 2 isoform a L3MBTL4 0.181 l(3)mbt-like 4 SFMBT2 0.170 Scm-like with four mbt domains 2 SFMBT1 0.159 Scm-like with four mbt domains 1 SFMBT1 0.159 Scm-like with four mbt domains 1 SFMBT1 0.159 Scm-like with four mbt domains 1 SCMH1 0.148 sex comb on midleg 1 isoform 1 SCMH1 0.148 sex comb on midleg 1 isoform 2 PHC1 0.148 polyhomeotic 1-like L3MBTL3 0.148 l(3)mbt-like 3 isoform b L3MBTL3 0.148 l(3)mbt-like 3 isoform a SAMD11 0.148 sterile alpha motif domain containing 11 PHC3 0.137 polyhomeotic like 3 SCML2 0.126 sex comb on midleg-like 2 SCML4 0.121 sex comb on midleg-like 4 SAMD7 0.104 sterile alpha motif domain containing 7 SARM1 0.099 sterile alpha and TIR motif containing 1 SCML1 0.088 sex comb on midleg-like 1 isoform a SCML1 0.088 sex comb on midleg-like 1 isoform c SCML1 0.088 sex comb on midleg-like 1 isoform c SCML1 0.088 sex comb on midleg-like 1 isoform b WDSUB1 0.033 WD repeat, sterile alpha motif and U-box domain con... WDSUB1 0.033 WD repeat, sterile alpha motif and U-box domain con... WDSUB1 0.033 WD repeat, sterile alpha motif and U-box domain con... SEC23IP 0.027 Sec23-interacting protein p125 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.