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Name: SCML2 Sequence: fasta or formatted (700aa) NCBI GI: 5174669
Description:

sex comb on midleg-like 2

Referenced in:

Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         33           2
 C cysteine            2.1         15           1
 D aspartate           5.7         40           2
 E glutamate           5.1         36           2
 F phenylalanine       3.6         25           1
 G glycine             6.3         44           2
 H histidine           2.1         15           1
 I isoleucine          4.3         30           1
 K lysine              8.1         57           2
 L leucine             7.6         53           2
 M methionine          2.3         16           2
 N asparagine          3.9         27           2
 P proline             8.7         61           2
 Q glutamine           4.6         32           2
 R arginine            4.3         30           2
 S serine             11.3         79           3
 T threonine           5.4         38           2
 V valine              6.4         45           2
 W tryptophan          1.0          7           1
 Y tyrosine            2.4         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sex comb on midleg-like 2 
SCMH1                 0.410   sex comb on midleg 1 isoform 1 
SCMH1                 0.387   sex comb on midleg 1 isoform 2 
SCML4                 0.143   sex comb on midleg-like 4 
L3MBTL                0.108   l(3)mbt-like isoform I 
L3MBTL                0.108   l(3)mbt-like isoform II 
L3MBTL4               0.108   l(3)mbt-like 4 
L3MBTL3               0.104   l(3)mbt-like 3 isoform b 
L3MBTL3               0.104   l(3)mbt-like 3 isoform a 
SFMBT1                0.090   Scm-like with four mbt domains 1 
SFMBT1                0.090   Scm-like with four mbt domains 1 
SFMBT1                0.090   Scm-like with four mbt domains 1 
MBTD1                 0.080   mbt domain containing 1 
L3MBTL2               0.075   l(3)mbt-like 2 
SFMBT2                0.073   Scm-like with four mbt domains 2 
SCML1                 0.063   sex comb on midleg-like 1 isoform a 
SCML1                 0.063   sex comb on midleg-like 1 isoform c 
SCML1                 0.063   sex comb on midleg-like 1 isoform c 
SCML1                 0.063   sex comb on midleg-like 1 isoform b 
PHC3                  0.031   polyhomeotic like 3 
PHC1                  0.030   polyhomeotic 1-like 
PHC2                  0.025   polyhomeotic-like 2 isoform b 
PHC2                  0.025   polyhomeotic-like 2 isoform a 
SAMD13                0.016   sterile alpha motif domain containing 13 isoform 2 ...
SAMD13                0.016   sterile alpha motif domain containing 13 isoform 2 ...
SAMD13                0.016   sterile alpha motif domain containing 13 isoform 1 [...
SAMD7                 0.016   sterile alpha motif domain containing 7 
SAMD11                0.015   sterile alpha motif domain containing 11 
SAMD1                 0.014   sterile alpha motif domain containing 1 
KIAA1217              0.010   sickle tail isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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