SAMD11 36000

Name: SAMD11	Sequence: fasta or formatted (681aa)		NCBI GI: 76881819
Description: sterile alpha motif domain containing 11		Referenced in: Additional Interaction Domain Families
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.8 67 4 C cysteine 1.8 12 1 D aspartate 4.3 29 2 E glutamate 6.8 46 2 F phenylalanine 2.3 16 1 G glycine 10.3 70 3 H histidine 3.2 22 2 I isoleucine 1.6 11 1 K lysine 2.8 19 2 L leucine 11.7 80 3 M methionine 1.2 8 1 N asparagine 1.5 10 1 P proline 12.3 84 3 Q glutamine 4.6 31 2 R arginine 8.4 57 2 S serine 7.9 54 2 T threonine 4.1 28 2 V valine 3.7 25 1 W tryptophan 0.6 4 1 Y tyrosine 1.2 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sterile alpha motif domain containing 11 SAMD7 0.066 sterile alpha motif domain containing 7 PHC2 0.036 polyhomeotic-like 2 isoform b PHC2 0.036 polyhomeotic-like 2 isoform a PHC1 0.032 polyhomeotic 1-like PHC3 0.031 polyhomeotic like 3 SAMD1 0.028 sterile alpha motif domain containing 1 L3MBTL3 0.028 l(3)mbt-like 3 isoform b L3MBTL3 0.028 l(3)mbt-like 3 isoform a SFMBT2 0.027 Scm-like with four mbt domains 2 L3MBTL4 0.027 l(3)mbt-like 4 SCML4 0.021 sex comb on midleg-like 4 SCMH1 0.020 sex comb on midleg 1 isoform 1 SCMH1 0.020 sex comb on midleg 1 isoform 2 SAMD13 0.020 sterile alpha motif domain containing 13 isoform 2 ... SAMD13 0.020 sterile alpha motif domain containing 13 isoform 2 ... SAMD13 0.020 sterile alpha motif domain containing 13 isoform 1 [... C15orf39 0.018 hypothetical protein LOC56905 SF1 0.017 splicing factor 1 isoform 2 SFMBT1 0.017 Scm-like with four mbt domains 1 SFMBT1 0.017 Scm-like with four mbt domains 1 SFMBT1 0.017 Scm-like with four mbt domains 1 SFPQ 0.017 splicing factor proline/glutamine rich (polypyrimidin... FLJ22184 0.016 PREDICTED: hypothetical protein FLJ22184 BSN 0.016 bassoon protein COL1A2 0.016 alpha 2 type I collagen COL3A1 0.016 collagen type III alpha 1 preproprotein SF1 0.016 splicing factor 1 isoform 1 ZSCAN18 0.015 zinc finger and SCAN domain containing 18 isoform 3... ZSCAN18 0.015 zinc finger and SCAN domain containing 18 isoform 3... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.