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Search of human proteins with 157743282
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|157743282 synaptonemal complex central element protein 2
[Homo sapiens]
(218 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|157743282 synaptonemal complex central element protein 2 [Hom... 445 e-125
gi|21361440 RAB3A interacting protein (rabin3)-like 1 [Homo sapi... 37 0.010
gi|157785668 coiled-coil domain containing 39 [Homo sapiens] 36 0.022
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens] 36 0.029
gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens] 36 0.029
gi|221316624 dystonin isoform 4 [Homo sapiens] 36 0.029
gi|221316622 dystonin isoform 3 [Homo sapiens] 36 0.029
gi|221316618 dystonin isoform 2 [Homo sapiens] 36 0.029
gi|34577047 dystonin isoform 1 [Homo sapiens] 36 0.029
gi|34577049 dystonin isoform 1eA precursor [Homo sapiens] 36 0.029
gi|71061468 centromere protein E [Homo sapiens] 35 0.038
gi|154277118 spectrin repeat containing, nuclear envelope 1 isof... 35 0.049
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo... 35 0.049
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof... 35 0.049
gi|55770834 centromere protein F [Homo sapiens] 35 0.049
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 34 0.084
gi|222446620 hypothetical protein LOC342346 [Homo sapiens] 34 0.11
gi|114155142 nuclear pore complex-associated protein TPR [Homo s... 34 0.11
gi|46049114 M-phase phosphoprotein 1 [Homo sapiens] 34 0.11
gi|7662302 TBK1 binding protein 1 [Homo sapiens] 33 0.14
gi|163310725 ER degradation enhancer, mannosidase alpha-like 3 [... 33 0.14
gi|82880656 coiled-coil domain containing 46 isoform a [Homo sap... 33 0.14
gi|102467235 inner centromere protein antigens 135/155kDa isofor... 33 0.14
gi|16262452 cingulin [Homo sapiens] 33 0.19
gi|19111150 angiomotin isoform 2 [Homo sapiens] 33 0.19
gi|166064029 angiomotin isoform 1 [Homo sapiens] 33 0.19
gi|62241003 cardiomyopathy associated 5 [Homo sapiens] 33 0.19
gi|30089962 CDC42-binding protein kinase alpha isoform B [Homo s... 33 0.19
gi|30089960 CDC42-binding protein kinase alpha isoform A [Homo s... 33 0.19
gi|30260188 Golgi autoantigen, golgin subfamily a, 5 [Homo sapiens] 33 0.19
>gi|157743282 synaptonemal complex central element protein 2 [Homo
sapiens]
Length = 218
Score = 445 bits (1145), Expect = e-125
Identities = 218/218 (100%), Positives = 218/218 (100%)
Query: 1 MERQGVDVPHVKCKDQEPQPLGESKEHPRWEENCEEEAGGGPASASCQLTVLEGKSGLYF 60
MERQGVDVPHVKCKDQEPQPLGESKEHPRWEENCEEEAGGGPASASCQLTVLEGKSGLYF
Sbjct: 1 MERQGVDVPHVKCKDQEPQPLGESKEHPRWEENCEEEAGGGPASASCQLTVLEGKSGLYF 60
Query: 61 SSLDSSIDILQKRAQELIENINKSRQKDHALMTNFRNSLKTKVSDLTEKLEERIYQIYND 120
SSLDSSIDILQKRAQELIENINKSRQKDHALMTNFRNSLKTKVSDLTEKLEERIYQIYND
Sbjct: 61 SSLDSSIDILQKRAQELIENINKSRQKDHALMTNFRNSLKTKVSDLTEKLEERIYQIYND 120
Query: 121 HNKIIQEKLQEFTQKMAKISHLETELKQVCHSVETVYKDLCLQPEQSLRLRWGPDHSRGK 180
HNKIIQEKLQEFTQKMAKISHLETELKQVCHSVETVYKDLCLQPEQSLRLRWGPDHSRGK
Sbjct: 121 HNKIIQEKLQEFTQKMAKISHLETELKQVCHSVETVYKDLCLQPEQSLRLRWGPDHSRGK 180
Query: 181 SPPRPGNSQPPDVFVSSVAETTSQATASEVQTNRDGEC 218
SPPRPGNSQPPDVFVSSVAETTSQATASEVQTNRDGEC
Sbjct: 181 SPPRPGNSQPPDVFVSSVAETTSQATASEVQTNRDGEC 218
>gi|21361440 RAB3A interacting protein (rabin3)-like 1 [Homo
sapiens]
Length = 382
Score = 37.4 bits (85), Expect = 0.010
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 30/183 (16%)
Query: 31 EENCEEEAGGGPASASCQLTVLEGKSGLYFSSLDSSIDILQKRAQELIENINKSRQKDHA 90
E + EEA G A+ QL VL +S SS++I +K ++ L E ++++ QK+
Sbjct: 41 ETSAGEEAQGQEGPAAAQLDVLRLRS--------SSMEIREKGSEFLKEELHRA-QKELK 91
Query: 91 LMTNFRNSLKTKVSDLTEKLEERIYQIYNDHNKIIQE----------KLQEFTQKMAKIS 140
L L L ++LEE ++ + +K+++E +L+E K+ +
Sbjct: 92 LKDEECERLSKVREQLEQELEELTASLFEEAHKMVREANMKQAASEKQLKEARGKIDMLQ 151
Query: 141 HLETELKQVCHSVETVYKDLCLQPEQSLRLRWGP--DHSRGKSP---------PRPGNSQ 189
T LK + + + L P+ + GP HSR KS P G++
Sbjct: 152 AEVTALKTLVITSTPASPNRELHPQLLSPTKAGPRKGHSRHKSTSSTLCPAVCPAAGHTL 211
Query: 190 PPD 192
PD
Sbjct: 212 TPD 214
>gi|157785668 coiled-coil domain containing 39 [Homo sapiens]
Length = 941
Score = 36.2 bits (82), Expect = 0.022
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 70 LQKRAQELIENINKSRQKDHALMTNFRNSLKTKVSDLTEKLEERIYQIYNDHNKIIQEKL 129
L+ L +N++ AL N + +K + + T +L++ +HN+IIQ KL
Sbjct: 307 LKGELDSLKATVNRTSSDLEALRKNI-SKIKKDIHEETARLQKT-----KNHNEIIQTKL 360
Query: 130 QEFTQKMAKISHLETELKQVCHSVETVYKDLCLQ 163
+E T+K + T L+ + E K++ +Q
Sbjct: 361 KEITEKTMSVEEKATNLEDMLKEEEKDVKEVDVQ 394
>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
Length = 3907
Score = 35.8 bits (81), Expect = 0.029
Identities = 27/116 (23%), Positives = 53/116 (45%), Gaps = 6/116 (5%)
Query: 71 QKRAQELIENINKSRQKDHALMTNFRNSLKTKVSDLTEKLEERIYQIYNDHNKIIQEKLQ 130
+K +QEL+E + +Q M +S+K + ++L E+L + +++ Q KL+
Sbjct: 3115 EKPSQELLEYNIQQKQSQMLEMQVELSSMKDRATELQEQLSSEKMVVAELKSELAQTKLE 3174
Query: 131 EFTQKMAKISHLE------TELKQVCHSVETVYKDLCLQPEQSLRLRWGPDHSRGK 180
T A+ HL+ E+K V + L + ++S L+W + + K
Sbjct: 3175 LETTLKAQHKHLKELEAFRLEVKDKTDEVHLLNDTLASEQKKSRELQWALEKEKAK 3230
>gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]
Length = 3899
Score = 35.8 bits (81), Expect = 0.029
Identities = 27/116 (23%), Positives = 53/116 (45%), Gaps = 6/116 (5%)
Query: 71 QKRAQELIENINKSRQKDHALMTNFRNSLKTKVSDLTEKLEERIYQIYNDHNKIIQEKLQ 130
+K +QEL+E + +Q M +S+K + ++L E+L + +++ Q KL+
Sbjct: 3107 EKPSQELLEYNIQQKQSQMLEMQVELSSMKDRATELQEQLSSEKMVVAELKSELAQTKLE 3166
Query: 131 EFTQKMAKISHLE------TELKQVCHSVETVYKDLCLQPEQSLRLRWGPDHSRGK 180
T A+ HL+ E+K V + L + ++S L+W + + K
Sbjct: 3167 LETTLKAQHKHLKELEAFRLEVKDKTDEVHLLNDTLASEQKKSRELQWALEKEKAK 3222
>gi|221316624 dystonin isoform 4 [Homo sapiens]
Length = 5526
Score = 35.8 bits (81), Expect = 0.029
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 62 SLDSSIDILQKRAQELIENINKSRQKDHALMTNFRNSLKTKVSDLTEKLEERIYQIYNDH 121
S + ++++ L EN K Q+D AL+ N K K L K E+ ++
Sbjct: 1639 SAQALAEVVKNTENFLKENGEKLSQEDKALIEQKLNEAKIKCEQLNLKAEQSKKEL---- 1694
Query: 122 NKIIQEKLQEFTQKMAKISHLE---TELKQVCHSVETVYKD 159
+K++ ++E T+K+A + LE T+++ + + V KD
Sbjct: 1695 DKVVTTAIKEETEKVAAVKQLEESKTKIENLLDWLSNVDKD 1735
Score = 27.7 bits (60), Expect = 7.9
Identities = 29/123 (23%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 22 GESKEHPRWEENCEEEA------GGGPASASCQLTVLEGKSGLYFSSLDSSIDILQKRAQ 75
GE ++ +W + E GG P +A QL V + F + + + L ++ Q
Sbjct: 4436 GEIEDLQQWLTDTERHLLASKPLGGLPETAKEQLNV-HMEVCAAFEAKEETYKSLMQKGQ 4494
Query: 76 ELIENINKSRQ----KDHALMTNFRNSLKTKVSDLTEKLEERIYQIYNDHNKIIQEKLQE 131
+++ KS + +D + S++TK+++ KLEE + HN +Q+ +
Sbjct: 4495 QMLARCPKSAETNIDQDINNLKEKWESVETKLNERKTKLEEALNLAMEFHNS-LQDFINW 4553
Query: 132 FTQ 134
TQ
Sbjct: 4554 LTQ 4556
>gi|221316622 dystonin isoform 3 [Homo sapiens]
Length = 5537
Score = 35.8 bits (81), Expect = 0.029
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 62 SLDSSIDILQKRAQELIENINKSRQKDHALMTNFRNSLKTKVSDLTEKLEERIYQIYNDH 121
S + ++++ L EN K Q+D AL+ N K K L K E+ ++
Sbjct: 1650 SAQALAEVVKNTENFLKENGEKLSQEDKALIEQKLNEAKIKCEQLNLKAEQSKKEL---- 1705
Query: 122 NKIIQEKLQEFTQKMAKISHLE---TELKQVCHSVETVYKD 159
+K++ ++E T+K+A + LE T+++ + + V KD
Sbjct: 1706 DKVVTTAIKEETEKVAAVKQLEESKTKIENLLDWLSNVDKD 1746
Score = 27.7 bits (60), Expect = 7.9
Identities = 29/123 (23%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 22 GESKEHPRWEENCEEEA------GGGPASASCQLTVLEGKSGLYFSSLDSSIDILQKRAQ 75
GE ++ +W + E GG P +A QL V + F + + + L ++ Q
Sbjct: 4447 GEIEDLQQWLTDTERHLLASKPLGGLPETAKEQLNV-HMEVCAAFEAKEETYKSLMQKGQ 4505
Query: 76 ELIENINKSRQ----KDHALMTNFRNSLKTKVSDLTEKLEERIYQIYNDHNKIIQEKLQE 131
+++ KS + +D + S++TK+++ KLEE + HN +Q+ +
Sbjct: 4506 QMLARCPKSAETNIDQDINNLKEKWESVETKLNERKTKLEEALNLAMEFHNS-LQDFINW 4564
Query: 132 FTQ 134
TQ
Sbjct: 4565 LTQ 4567
>gi|221316618 dystonin isoform 2 [Homo sapiens]
Length = 5675
Score = 35.8 bits (81), Expect = 0.029
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 62 SLDSSIDILQKRAQELIENINKSRQKDHALMTNFRNSLKTKVSDLTEKLEERIYQIYNDH 121
S + ++++ L EN K Q+D AL+ N K K L K E+ ++
Sbjct: 1788 SAQALAEVVKNTENFLKENGEKLSQEDKALIEQKLNEAKIKCEQLNLKAEQSKKEL---- 1843
Query: 122 NKIIQEKLQEFTQKMAKISHLE---TELKQVCHSVETVYKD 159
+K++ ++E T+K+A + LE T+++ + + V KD
Sbjct: 1844 DKVVTTAIKEETEKVAAVKQLEESKTKIENLLDWLSNVDKD 1884
Score = 27.7 bits (60), Expect = 7.9
Identities = 29/123 (23%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 22 GESKEHPRWEENCEEEA------GGGPASASCQLTVLEGKSGLYFSSLDSSIDILQKRAQ 75
GE ++ +W + E GG P +A QL V + F + + + L ++ Q
Sbjct: 4585 GEIEDLQQWLTDTERHLLASKPLGGLPETAKEQLNV-HMEVCAAFEAKEETYKSLMQKGQ 4643
Query: 76 ELIENINKSRQ----KDHALMTNFRNSLKTKVSDLTEKLEERIYQIYNDHNKIIQEKLQE 131
+++ KS + +D + S++TK+++ KLEE + HN +Q+ +
Sbjct: 4644 QMLARCPKSAETNIDQDINNLKEKWESVETKLNERKTKLEEALNLAMEFHNS-LQDFINW 4702
Query: 132 FTQ 134
TQ
Sbjct: 4703 LTQ 4705
>gi|34577047 dystonin isoform 1 [Homo sapiens]
Length = 5497
Score = 35.8 bits (81), Expect = 0.029
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 62 SLDSSIDILQKRAQELIENINKSRQKDHALMTNFRNSLKTKVSDLTEKLEERIYQIYNDH 121
S + ++++ L EN K Q+D AL+ N K K L K E+ ++
Sbjct: 1610 SAQALAEVVKNTENFLKENGEKLSQEDKALIEQKLNEAKIKCEQLNLKAEQSKKEL---- 1665
Query: 122 NKIIQEKLQEFTQKMAKISHLE---TELKQVCHSVETVYKD 159
+K++ ++E T+K+A + LE T+++ + + V KD
Sbjct: 1666 DKVVTTAIKEETEKVAAVKQLEESKTKIENLLDWLSNVDKD 1706
Score = 27.7 bits (60), Expect = 7.9
Identities = 29/123 (23%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 22 GESKEHPRWEENCEEEA------GGGPASASCQLTVLEGKSGLYFSSLDSSIDILQKRAQ 75
GE ++ +W + E GG P +A QL V + F + + + L ++ Q
Sbjct: 4407 GEIEDLQQWLTDTERHLLASKPLGGLPETAKEQLNV-HMEVCAAFEAKEETYKSLMQKGQ 4465
Query: 76 ELIENINKSRQ----KDHALMTNFRNSLKTKVSDLTEKLEERIYQIYNDHNKIIQEKLQE 131
+++ KS + +D + S++TK+++ KLEE + HN +Q+ +
Sbjct: 4466 QMLARCPKSAETNIDQDINNLKEKWESVETKLNERKTKLEEALNLAMEFHNS-LQDFINW 4524
Query: 132 FTQ 134
TQ
Sbjct: 4525 LTQ 4527
>gi|34577049 dystonin isoform 1eA precursor [Homo sapiens]
Length = 5171
Score = 35.8 bits (81), Expect = 0.029
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 62 SLDSSIDILQKRAQELIENINKSRQKDHALMTNFRNSLKTKVSDLTEKLEERIYQIYNDH 121
S + ++++ L EN K Q+D AL+ N K K L K E+ ++
Sbjct: 1284 SAQALAEVVKNTENFLKENGEKLSQEDKALIEQKLNEAKIKCEQLNLKAEQSKKEL---- 1339
Query: 122 NKIIQEKLQEFTQKMAKISHLE---TELKQVCHSVETVYKD 159
+K++ ++E T+K+A + LE T+++ + + V KD
Sbjct: 1340 DKVVTTAIKEETEKVAAVKQLEESKTKIENLLDWLSNVDKD 1380
Score = 27.7 bits (60), Expect = 7.9
Identities = 29/123 (23%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 22 GESKEHPRWEENCEEEA------GGGPASASCQLTVLEGKSGLYFSSLDSSIDILQKRAQ 75
GE ++ +W + E GG P +A QL V + F + + + L ++ Q
Sbjct: 4081 GEIEDLQQWLTDTERHLLASKPLGGLPETAKEQLNV-HMEVCAAFEAKEETYKSLMQKGQ 4139
Query: 76 ELIENINKSRQ----KDHALMTNFRNSLKTKVSDLTEKLEERIYQIYNDHNKIIQEKLQE 131
+++ KS + +D + S++TK+++ KLEE + HN +Q+ +
Sbjct: 4140 QMLARCPKSAETNIDQDINNLKEKWESVETKLNERKTKLEEALNLAMEFHNS-LQDFINW 4198
Query: 132 FTQ 134
TQ
Sbjct: 4199 LTQ 4201
>gi|71061468 centromere protein E [Homo sapiens]
Length = 2701
Score = 35.4 bits (80), Expect = 0.038
Identities = 26/102 (25%), Positives = 56/102 (54%), Gaps = 17/102 (16%)
Query: 72 KRAQELIENINKSRQKDHALMTNFRNSLKT-KVSDLTEKLEERIYQIYNDHNKI--IQEK 128
K+ QE++ +++K+HA+ S +++++ EKL+E+ Q+ ++ +QE+
Sbjct: 1095 KKQQEIV-----AQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEE 1149
Query: 129 LQEFTQKMAKISHLETELKQVCHSVETVYKDLCLQPEQSLRL 170
+ E +K+ +I +L+ ELK K+L L+ ++ RL
Sbjct: 1150 MSEMQKKINEIENLKNELKN---------KELTLEHMETERL 1182
Score = 29.6 bits (65), Expect = 2.1
Identities = 23/102 (22%), Positives = 46/102 (45%), Gaps = 19/102 (18%)
Query: 72 KRAQELIENINKSRQKDHALMTNFRNSLKTKVSDLTEK---LEERI-------------- 114
+R + I N++K QK + + + L K +L EK ++ER+
Sbjct: 841 ERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERLNEMEQLKEQLENRD 900
Query: 115 --YQIYNDHNKIIQEKLQEFTQKMAKISHLETELKQVCHSVE 154
Q +I EKLQ+ +++ ++ + +LKQ+ S++
Sbjct: 901 STLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQ 942
>gi|154277118 spectrin repeat containing, nuclear envelope 1 isoform 4
[Homo sapiens]
Length = 3321
Score = 35.0 bits (79), Expect = 0.049
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 25/131 (19%)
Query: 36 EEAGGGPASASCQLTVLEGKSGLYFSSLDSSI-----DILQKRAQELIENINKSRQ---- 86
E A G QL++L+ Y S+ D SI ++LQ++ +EL ++ RQ
Sbjct: 2242 ENAVGSWTDDLTQLSLLKDTLSAYISADDISILNERVELLQRQWEELCHQLSLRRQQIGE 2301
Query: 87 ---------KDHALMTNFRNSLKTKVSD----LTEKLEERIYQIYNDHNKIIQE---KLQ 130
+ + + + +++KVS L E++ E++ + Y + I QE +LQ
Sbjct: 2302 RLNEWAVFSEKNKELCEWLTQMESKVSQNGDILIEEMIEKLKKDYQEEIAIAQENKIQLQ 2361
Query: 131 EFTQKMAKISH 141
+ +++AK SH
Sbjct: 2362 QMGERLAKASH 2372
>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
[Homo sapiens]
Length = 8749
Score = 35.0 bits (79), Expect = 0.049
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 25/131 (19%)
Query: 36 EEAGGGPASASCQLTVLEGKSGLYFSSLDSSI-----DILQKRAQELIENINKSRQ---- 86
E A G QL++L+ Y S+ D SI ++LQ++ +EL ++ RQ
Sbjct: 7647 ENAVGSWTDDLTQLSLLKDTLSAYISADDISILNERVELLQRQWEELCHQLSLRRQQIGE 7706
Query: 87 ---------KDHALMTNFRNSLKTKVSD----LTEKLEERIYQIYNDHNKIIQE---KLQ 130
+ + + + +++KVS L E++ E++ + Y + I QE +LQ
Sbjct: 7707 RLNEWAVFSEKNKELCEWLTQMESKVSQNGDILIEEMIEKLKKDYQEEIAIAQENKIQLQ 7766
Query: 131 EFTQKMAKISH 141
+ +++AK SH
Sbjct: 7767 QMGERLAKASH 7777
Score = 32.7 bits (73), Expect = 0.25
Identities = 19/95 (20%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 75 QELIENINKSRQKDHALMTNFRNSLKTKVSDLTEKLEERIYQIYNDHNKIIQEKLQEFTQ 134
Q+ + + +++ L N ++ ++V D +KL+ + + K+ + +E +
Sbjct: 4076 QDADQQLQNMKRRHSELELNIAQNMVSQVKDFVKKLQSKQASVNTIIEKVNKLTKKEESP 4135
Query: 135 KMAKISHLETELKQVCHSVETVYKDLCLQPEQSLR 169
+ +I+HL + +C +LCLQ E+ L+
Sbjct: 4136 EHKEINHLNDQWLDLCRQ----SNNLCLQREEDLQ 4166
Score = 31.6 bits (70), Expect = 0.55
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 61 SSLDSSIDILQKRAQELIENINKSRQKDHALMTNFRNSLKTKVSDLTEKLEERIYQIYND 120
+ +D ++ + + +E + K +K H+L+ + R + V L E ER+ + +D
Sbjct: 3718 TKIDKVDTVMMGKKLKTLEVLLKDMEKGHSLLKSAREKGERAVKYLEEGEAERLRKEIHD 3777
Query: 121 HNKIIQEKLQEFTQKMAKIS-------HLETELKQVCHSVE---TVYKDLCLQPEQ 166
H E+L+E T + K HL E C ++ Y+++ PE+
Sbjct: 3778 H----MEQLKELTSTVRKEHMTLEKGLHLAKEFSDKCKALTQWIAEYQEILHVPEE 3829
>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
[Homo sapiens]
Length = 8797
Score = 35.0 bits (79), Expect = 0.049
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 25/131 (19%)
Query: 36 EEAGGGPASASCQLTVLEGKSGLYFSSLDSSI-----DILQKRAQELIENINKSRQ---- 86
E A G QL++L+ Y S+ D SI ++LQ++ +EL ++ RQ
Sbjct: 7718 ENAVGSWTDDLTQLSLLKDTLSAYISADDISILNERVELLQRQWEELCHQLSLRRQQIGE 7777
Query: 87 ---------KDHALMTNFRNSLKTKVSD----LTEKLEERIYQIYNDHNKIIQE---KLQ 130
+ + + + +++KVS L E++ E++ + Y + I QE +LQ
Sbjct: 7778 RLNEWAVFSEKNKELCEWLTQMESKVSQNGDILIEEMIEKLKKDYQEEIAIAQENKIQLQ 7837
Query: 131 EFTQKMAKISH 141
+ +++AK SH
Sbjct: 7838 QMGERLAKASH 7848
Score = 32.7 bits (73), Expect = 0.25
Identities = 19/95 (20%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 75 QELIENINKSRQKDHALMTNFRNSLKTKVSDLTEKLEERIYQIYNDHNKIIQEKLQEFTQ 134
Q+ + + +++ L N ++ ++V D +KL+ + + K+ + +E +
Sbjct: 4147 QDADQQLQNMKRRHSELELNIAQNMVSQVKDFVKKLQSKQASVNTIIEKVNKLTKKEESP 4206
Query: 135 KMAKISHLETELKQVCHSVETVYKDLCLQPEQSLR 169
+ +I+HL + +C +LCLQ E+ L+
Sbjct: 4207 EHKEINHLNDQWLDLCRQ----SNNLCLQREEDLQ 4237
Score = 31.6 bits (70), Expect = 0.55
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 14/116 (12%)
Query: 61 SSLDSSIDILQKRAQELIENINKSRQKDHALMTNFRNSLKTKVSDLTEKLEERIYQIYND 120
+ +D ++ + + +E + K +K H+L+ + R + V L E ER+ + +D
Sbjct: 3733 TKIDKVDTVMMGKKLKTLEVLLKDMEKGHSLLKSAREKGERAVKYLEEGEAERLRKEIHD 3792
Query: 121 HNKIIQEKLQEFTQKMAKIS-------HLETELKQVCHSVE---TVYKDLCLQPEQ 166
H E+L+E T + K HL E C ++ Y+++ PE+
Sbjct: 3793 H----MEQLKELTSTVRKEHMTLEKGLHLAKEFSDKCKALTQWIAEYQEILHVPEE 3844
>gi|55770834 centromere protein F [Homo sapiens]
Length = 3114
Score = 35.0 bits (79), Expect = 0.049
Identities = 26/89 (29%), Positives = 50/89 (56%), Gaps = 9/89 (10%)
Query: 64 DSSIDILQKRA---QELIENINKSRQKDHALMTNFRNSLKTKVSDLTEKLEER-IYQIYN 119
D S D+L+KR ++L + ++K+ ++ AL++ +L+ K + E EE+ ++ +
Sbjct: 568 DCSQDLLKKREHHIEQLNDKLSKTEKESKALLS----ALELKKKEYEELKEEKTLFSCWK 623
Query: 120 DHN-KIIQEKLQEFTQKMAKISHLETELK 147
N K++ + E +KI+HLET LK
Sbjct: 624 SENEKLLTQMESEKENLQSKINHLETCLK 652
Score = 33.9 bits (76), Expect = 0.11
Identities = 38/167 (22%), Positives = 67/167 (40%), Gaps = 28/167 (16%)
Query: 53 EGKSGLYFSS---LDSSIDILQKRAQELIENINKSRQKDHALMTNFRNSLKTKVSDLTEK 109
+GK L S L+ +ILQK +L + +QK +M + L T++ +L E
Sbjct: 2792 QGKMKLLIKSCKQLEEEKEILQKELSQL--QAAQEKQKTGTVMDTKVDELTTEIKELKET 2849
Query: 110 LEERIYQIYNDHNKIIQEKLQEFTQKMAKISHLETELKQVCHSVETVYKDLCLQPEQSLR 169
LEE+ ++ E+ K + +L++ +ET LC Q +
Sbjct: 2850 LEEK------------TKEADEYLDKYCSLLISHEKLEKAKEMLETQVAHLCSQQSK--- 2894
Query: 170 LRWGPDHSRGK---SPPRPGNSQPPDVFVSSVAETTSQATASEVQTN 213
SRG P PG S P V ++ ++A+ +++
Sbjct: 2895 -----QDSRGSPLLGPVVPGPSPIPSVTEKRLSSGQNKASGKRQRSS 2936
Score = 32.0 bits (71), Expect = 0.42
Identities = 49/198 (24%), Positives = 70/198 (35%), Gaps = 44/198 (22%)
Query: 13 CKDQEPQPLGESKEHPRWEENCEEEAGGGPASASCQLTVLEGKSGLYFSSLDSS---IDI 69
C DQE E P EE E + +L E K L S D+
Sbjct: 2276 CGDQEIMKATEQSLDPPIEE--EHQLRNSIEKLRARLEADEKKQLCVLQQLKESEHHADL 2333
Query: 70 LQKRAQELIENINKSRQKDHALMTNFRNS------LKTKVSDLTEKL------------- 110
L+ R + L + +R NS LK K+ +T+ L
Sbjct: 2334 LKGRVENLERELEIARTNQEHAALEAENSKGEVETLKAKIEGMTQSLRGLELDVVTIRSE 2393
Query: 111 -----------EERIYQ---IYNDHNKIIQEKLQEFTQKMAKISH----LETELKQVCHS 152
+ERI + I + I+QEK QE Q K S L+T+LK++
Sbjct: 2394 KENLTNELQKEQERISELEIINSSFENILQEKEQEKVQMKEKSSTAMEMLQTQLKELNER 2453
Query: 153 VETVYKD--LCLQPEQSL 168
V ++ D C EQ+L
Sbjct: 2454 VAALHNDQEACKAKEQNL 2471
Score = 30.8 bits (68), Expect = 0.93
Identities = 33/148 (22%), Positives = 59/148 (39%), Gaps = 9/148 (6%)
Query: 21 LGESKEHPRWEENCEEEAGGGPASASCQLTVLEGKSGLYFSSLDSSID---ILQKRAQEL 77
L E E N +E + S Q+ LE + LD + + +LQ L
Sbjct: 2447 LKELNERVAALHNDQEACKAKEQNLSSQVECLELEKAQLLQGLDEAKNNYIVLQSSVNGL 2506
Query: 78 IENINKSRQKDHALMTNFRNSLKTKVSD---LTEKLE--ERIYQIYNDHNKIIQEKLQEF 132
I+ + +QK + LK ++ D L KL E +Q++ + N ++ E
Sbjct: 2507 IQEVEDGKQKLEKKDEEI-SRLKNQIQDQEQLVSKLSQVEGEHQLWKEQNLELRNLTVEL 2565
Query: 133 TQKMAKISHLETELKQVCHSVETVYKDL 160
QK+ + L+ +++ YK+L
Sbjct: 2566 EQKIQVLQSKNASLQDTLEVLQSSYKNL 2593
Score = 28.9 bits (63), Expect = 3.5
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 63 LDSSIDILQKRAQELIENINKSRQKDHALMTNFRNSLKTKVSDLTEKLEERIYQIYNDHN 122
L + +D L Q+L N+ + +QK F+ S + K ++L +EE N
Sbjct: 435 LQAELDKLTSVKQQLENNLEEFKQKLCRAEQAFQAS-QIKENELRRSMEEM-----KKEN 488
Query: 123 KIIQEKLQEFTQKMAKISHLETELKQV 149
+++ + QK ++ HLE ELK +
Sbjct: 489 NLLKSHSE---QKAREVCHLEAELKNI 512
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 34.3 bits (77), Expect = 0.084
Identities = 23/99 (23%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Query: 70 LQKRAQELIENINKSRQKDHALMTNFRNSLKTKVSDLTEKL-EERIYQIYNDHNKIIQEK 128
L+ E I+ I K+ +++ + + +K +V D+ +K EE+I ++ H K + K
Sbjct: 433 LKAEMDEQIKTIEKTSEEERISLQQELSRVKQEVVDVMKKSSEEQIAKLQKLHEKELARK 492
Query: 129 LQEFTQKM-AKISHLETELKQVCHSVETVYKDLCLQPEQ 166
QE T+K+ + + ++K ++ Y + + EQ
Sbjct: 493 EQELTKKLQTREREFQEQMKVALEKSQSEYLKISQEKEQ 531
Score = 32.7 bits (73), Expect = 0.25
Identities = 33/144 (22%), Positives = 64/144 (44%), Gaps = 10/144 (6%)
Query: 22 GESKEHPRWEENCEEEAGGGPASASCQLTVLEGKSGLYFSSLDSSIDILQKRAQELIENI 81
G +K EEN EE++ S Q +L + + L+ + ++ Q+L + I
Sbjct: 1892 GRNKPTELLEENTEEKS----KSHLVQPKLLSNMEAQH-NDLEFKLAGAEREKQKLGKEI 1946
Query: 82 NKSRQKDHALMTNFRNSLKTKVSDLTEKLEERIYQIYND----HNKIIQEKLQEF-TQKM 136
+ ++ L + L+ + ++ EE+I Q D HN +++ ++EF TQ
Sbjct: 1947 VRLQKDLRMLRKEHQQELEILKKEYDQEREEKIKQEQEDLELKHNSTLKQLMREFNTQLA 2006
Query: 137 AKISHLETELKQVCHSVETVYKDL 160
K LE +K+ + + V +L
Sbjct: 2007 QKEQELEMTIKETINKAQEVEAEL 2030
>gi|222446620 hypothetical protein LOC342346 [Homo sapiens]
Length = 1141
Score = 33.9 bits (76), Expect = 0.11
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 61 SSLDSSIDILQKRAQELIENINKSRQKDHALMTNFRNS---LKTKVSDLTEKLEERIYQI 117
SSL +++DILQK+ I ++ KSR K+ L + N +K + L + +E QI
Sbjct: 725 SSLGTTVDILQKK----IGSLQKSRLKEEELERIWGNQIEMMKDRYITLDKAVEN--LQI 778
Query: 118 YNDHNKIIQEKLQEFTQKMAKISHLETELKQ 148
D K +Q +++ S +E EL++
Sbjct: 779 RMDEFKTLQAQIKRLEMNKVNKSTMEEELRE 809
>gi|114155142 nuclear pore complex-associated protein TPR [Homo
sapiens]
Length = 2363
Score = 33.9 bits (76), Expect = 0.11
Identities = 38/164 (23%), Positives = 70/164 (42%), Gaps = 37/164 (22%)
Query: 11 VKCKDQEPQPLGESKEHPRWEENCEEEAGGGPASASCQLTVLEGKSGLYFSSLDSSIDIL 70
+K K E LG K + E C E + +++ LE + + L +S + L
Sbjct: 201 LKTKTDELLALGREKGNEILELKCNLE------NKKEEVSRLEEQ----MNGLKTSNEHL 250
Query: 71 QKRAQELIENINKSRQKDHALMTNFRNSL-----------------KTKVSDLTEKLEE- 112
QK ++L+ + +++++ ++ F N L + K ++LT +EE
Sbjct: 251 QKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIKLSNLYKSAADDSEAKSNELTRAVEEL 310
Query: 113 -RIYQIYNDHNKIIQEKLQEFTQK--------MAKISHLETELK 147
++ + + NK IQ+ L E Q + KI LE EL+
Sbjct: 311 HKLLKEAGEANKAIQDHLLEVEQSKDQMEKEMLEKIGRLEKELE 354
Score = 28.1 bits (61), Expect = 6.0
Identities = 25/107 (23%), Positives = 50/107 (46%), Gaps = 12/107 (11%)
Query: 67 IDILQKRAQELIENINKSRQKDHALMTNFRNSLKTKVSDLTEKLEERIYQIYNDHNKIIQ 126
+++L++ QEL +++N R+K + +L +K E + + NK+++
Sbjct: 1228 VELLERELQELQDSLNAEREK-----VQVTAKTMAQHEELMKKTE--TMNVVMETNKMLR 1280
Query: 127 EKL----QEFTQKMAKISHLETELKQVCH-SVETVYKDLCLQPEQSL 168
E+ Q+ Q AK+ LE ++ + + E K LQ E+ L
Sbjct: 1281 EEKERLEQDLQQMQAKVRKLELDILPLQEANAELSEKSGMLQAEKKL 1327
>gi|46049114 M-phase phosphoprotein 1 [Homo sapiens]
Length = 1780
Score = 33.9 bits (76), Expect = 0.11
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Query: 48 QLTVLEGKSGLYFSSLDSSIDILQKRAQELIENINKSRQKDHALMTNFRNSLKTKVSDLT 107
++ K L+ I+ LQ + + N+ ++K+H + +T + L
Sbjct: 1026 EIVKASSKKSHQIEELEQQIEKLQAEVKGYKDENNRLKEKEHKNQDDLLKEKETLIQQLK 1085
Query: 108 EKLEERIYQIYNDHNKIIQEK--LQEFTQKM----AKISHLETELK 147
E+L+E+ + +++ K L E TQ + AKI LET L+
Sbjct: 1086 EELQEKNVTLDVQIQHVVEGKRALSELTQGVTCYKAKIKELETILE 1131
Score = 28.5 bits (62), Expect = 4.6
Identities = 20/96 (20%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Query: 63 LDSSIDILQKRAQELIENINKSRQKDHALMTNFRNSLKTKVSDLTEKLEERIYQIYNDHN 122
L + ++ +++ +L N+ K+H T+ K+++L ++L+E + D
Sbjct: 1365 LATELEKWKEKCNDLETKNNQRSNKEHENNTDVLG----KLTNLQDELQESEQKYNADRK 1420
Query: 123 KIIQEKLQEFTQKMAKISHLETELKQVCHSVETVYK 158
K ++EK+ TQ + E+K+ E +K
Sbjct: 1421 KWLEEKMMLITQAKEAENIRNKEMKKYAEDRERFFK 1456
>gi|7662302 TBK1 binding protein 1 [Homo sapiens]
Length = 615
Score = 33.5 bits (75), Expect = 0.14
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 15/109 (13%)
Query: 87 KDHALMTNFRNSLKTKVSDLTEKLEERIYQIYNDHNKIIQEKLQEFTQKMAKI----SHL 142
KD +L+ + SL+ +++ +L++ NK +E+L E Q K+ S L
Sbjct: 94 KDGSLLEVEKVSLQQRLNQFQHELQK---------NKEQEEQLGEMIQAYEKLCVEKSDL 144
Query: 143 ETELKQVCHSVETVYKDLCLQPEQSLRLRWG-PDHSRGKSPPRPGNSQP 190
ETEL+++ VET + +C EQ LR + G D + P P + P
Sbjct: 145 ETELREMRALVETHLRQIC-GLEQQLRQQQGLQDAAFSNLSPPPAPAPP 192
>gi|163310725 ER degradation enhancer, mannosidase alpha-like 3
[Homo sapiens]
Length = 932
Score = 33.5 bits (75), Expect = 0.14
Identities = 24/102 (23%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 12 KCKDQEPQPLGESKEHPRWEENCEEEAGGGPASASCQLTVLEGKSGLYFSSLDSSIDILQ 71
K KD++P+ E++E P E + + ++G +S+S ++ +++ +S +SL+S + L
Sbjct: 792 KAKDRDPEM--ENEEQPSSENDSQNQSGEQISSSSQEVDLVDQESSEE-NSLNSHPESLS 848
Query: 72 KRAQELIENINKSRQKDHALMTNFRNSLKTKVSDLTEKLEER 113
+ +I+ S Q + + +L + +DL +L+E+
Sbjct: 849 LADMDNAASISPSEQTSNPTENHETTNLNGECTDLDNQLQEQ 890
>gi|82880656 coiled-coil domain containing 46 isoform a [Homo
sapiens]
Length = 955
Score = 33.5 bits (75), Expect = 0.14
Identities = 31/161 (19%), Positives = 70/161 (43%), Gaps = 17/161 (10%)
Query: 25 KEHPRWEENCEEEAGGGPASASCQLTVLEGKSGLYFSSLDSS--------IDILQKRAQE 76
++H R EN E++ Q+ + + + +++ I++ +R Q+
Sbjct: 688 RDHEREIENLEKQLRAANMEHENQIQEFKKRDAQVIADMEAQVHKLREELINVNSQRKQQ 747
Query: 77 LIENINKSRQKDHALMTNFRNSLKTKVSDLTEKLEERIYQIYNDHNKIIQEKL------- 129
L+E + R+++ T + K+ +EK++ + + + ++ EK
Sbjct: 748 LVE-LGLLREEEKQRATREHEIVVNKLKAESEKMKIELKKTHAAETEMTLEKANSKLKQI 806
Query: 130 -QEFTQKMAKISHLETELKQVCHSVETVYKDLCLQPEQSLR 169
+E+TQK+AK S + EL+ S++ L E+ L+
Sbjct: 807 EKEYTQKLAKSSQIIAELQTTISSLKEENSQQQLAAERRLQ 847
>gi|102467235 inner centromere protein antigens 135/155kDa isoform 1
[Homo sapiens]
Length = 918
Score = 33.5 bits (75), Expect = 0.14
Identities = 26/124 (20%), Positives = 51/124 (41%), Gaps = 15/124 (12%)
Query: 63 LDSSIDILQKRAQELIENINKSRQKDHALMTNFRNSLKTKVSDLTEKLEERIYQIYNDHN 122
+D ++K Q L EN+ + + + + ++ ++ K EER+ ++
Sbjct: 528 MDPKCSFVEKERQRL-ENLRRKEEAEQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARE 586
Query: 123 KIIQ---EKLQEFTQKMAKISHLETELKQVCHSVETVYKDLCL-----------QPEQSL 168
++ Q EK ++ QK A+I + K+ + E K Q E++
Sbjct: 587 RVEQMKEEKKKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEAR 646
Query: 169 RLRW 172
RLRW
Sbjct: 647 RLRW 650
>gi|16262452 cingulin [Homo sapiens]
Length = 1203
Score = 33.1 bits (74), Expect = 0.19
Identities = 27/122 (22%), Positives = 57/122 (46%), Gaps = 12/122 (9%)
Query: 48 QLTVLEGKSGLYFSSLDSSIDILQKRAQELIENINKSRQ---KDHALMTNFRNSLKTKVS 104
+LT L+G +S D ++ ++++ Q E + +S Q +DHA++ R + V
Sbjct: 496 ELTALKGALKEEVASRDQEVEHVRQQYQRDTEQLRRSMQDATQDHAVLEAERQKMSALVR 555
Query: 105 DLTEKLEERIYQ------IYNDHNKIIQEKLQEFTQKMAKISHLETELKQVCHSVETVYK 158
L +LEE + ++ + + ++ QE Q + +E EL + +E + +
Sbjct: 556 GLQRELEETSEETGHWQSMFQKNKEDLRATKQELLQLRMEKEEMEEELGE---KIEVLQR 612
Query: 159 DL 160
+L
Sbjct: 613 EL 614
>gi|19111150 angiomotin isoform 2 [Homo sapiens]
Length = 675
Score = 33.1 bits (74), Expect = 0.19
Identities = 12/47 (25%), Positives = 33/47 (70%)
Query: 112 ERIYQIYNDHNKIIQEKLQEFTQKMAKISHLETELKQVCHSVETVYK 158
+++ +I +D N+ ++++L+ +K+A++ +ETE+++V + E + K
Sbjct: 26 QQMVEILSDENRNLRQELEGCYEKVARLQKVETEIQRVSEAYENLVK 72
Score = 31.6 bits (70), Expect = 0.55
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 14/89 (15%)
Query: 72 KRAQELIENINKSRQKDHALMTNFRNSLKTKV-------SDLTEKLE-------ERIYQI 117
+R E EN+ KS K AL RN L+ ++ DL E+LE E+ Y+
Sbjct: 61 QRVSEAYENLVKSSSKREALEKAMRNKLEGEIRRMHDFNRDLRERLETANKQLAEKEYEG 120
Query: 118 YNDHNKIIQEKLQEFTQKMAKISHLETEL 146
D K I + + + + LE EL
Sbjct: 121 SEDTRKTISQLFAKNKESQREKEKLEAEL 149
>gi|166064029 angiomotin isoform 1 [Homo sapiens]
Length = 1084
Score = 33.1 bits (74), Expect = 0.19
Identities = 12/47 (25%), Positives = 33/47 (70%)
Query: 112 ERIYQIYNDHNKIIQEKLQEFTQKMAKISHLETELKQVCHSVETVYK 158
+++ +I +D N+ ++++L+ +K+A++ +ETE+++V + E + K
Sbjct: 435 QQMVEILSDENRNLRQELEGCYEKVARLQKVETEIQRVSEAYENLVK 481
Score = 31.6 bits (70), Expect = 0.55
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 14/89 (15%)
Query: 72 KRAQELIENINKSRQKDHALMTNFRNSLKTKV-------SDLTEKLE-------ERIYQI 117
+R E EN+ KS K AL RN L+ ++ DL E+LE E+ Y+
Sbjct: 470 QRVSEAYENLVKSSSKREALEKAMRNKLEGEIRRMHDFNRDLRERLETANKQLAEKEYEG 529
Query: 118 YNDHNKIIQEKLQEFTQKMAKISHLETEL 146
D K I + + + + LE EL
Sbjct: 530 SEDTRKTISQLFAKNKESQREKEKLEAEL 558
>gi|62241003 cardiomyopathy associated 5 [Homo sapiens]
Length = 4069
Score = 33.1 bits (74), Expect = 0.19
Identities = 23/99 (23%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 61 SSLDSSIDILQKRAQELIENINKSRQKDHALMT---NFRNSLKTKVSDLTEKLEERIYQI 117
S+LD++I ++ + E +EN+ + + A ++ +F N+++ S ++LEE+ ++
Sbjct: 3536 STLDTAISAVKVQLAEFLENLQEKSLRIEAFVSEIESFFNTIEENCSKNEKRLEEQNEEM 3595
Query: 118 YNDHNKIIQEKLQEFTQ-KMAKISHLETELKQVCHSVET 155
EK Q F + K K+ L ++ S++T
Sbjct: 3596 MKKVLAQYDEKAQSFEEVKKKKMEFLHEQMVHFLQSMDT 3634
>gi|30089962 CDC42-binding protein kinase alpha isoform B [Homo
sapiens]
Length = 1719
Score = 33.1 bits (74), Expect = 0.19
Identities = 14/79 (17%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 71 QKRAQELIENINKSRQKDHALMTNFRNSLKTKVSDLTEKLEERIYQIYNDHNKIIQEKLQ 130
Q +E + +++ L+T L +++ LT +Y+ + HN+ ++E+++
Sbjct: 751 QSEREEFESEFKQQYEREKVLLTEENKKLTSELDKLTT-----LYENLSIHNQQLEEEVK 805
Query: 131 EFTQKMAKISHLETELKQV 149
+ K ++H E ++ ++
Sbjct: 806 DLADKKESVAHWEAQITEI 824
>gi|30089960 CDC42-binding protein kinase alpha isoform A [Homo
sapiens]
Length = 1638
Score = 33.1 bits (74), Expect = 0.19
Identities = 14/79 (17%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 71 QKRAQELIENINKSRQKDHALMTNFRNSLKTKVSDLTEKLEERIYQIYNDHNKIIQEKLQ 130
Q +E + +++ L+T L +++ LT +Y+ + HN+ ++E+++
Sbjct: 670 QSEREEFESEFKQQYEREKVLLTEENKKLTSELDKLTT-----LYENLSIHNQQLEEEVK 724
Query: 131 EFTQKMAKISHLETELKQV 149
+ K ++H E ++ ++
Sbjct: 725 DLADKKESVAHWEAQITEI 743
>gi|30260188 Golgi autoantigen, golgin subfamily a, 5 [Homo sapiens]
Length = 731
Score = 33.1 bits (74), Expect = 0.19
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 11/82 (13%)
Query: 62 SLDSSIDILQKRAQELIENINKSRQK------DHALMTNFRNSLKTKVSDLTEKLEERIY 115
SL+ + L +R++E E +NK+R + DH+ L+ +V DLTE + +
Sbjct: 240 SLNQEMASLLQRSKETQEELNKARARVEKWNADHSKSDRMTRGLRAQVDDLTEAVAAKDS 299
Query: 116 QIYNDHNKIIQEKLQEFTQKMA 137
Q+ +++ +LQE Q ++
Sbjct: 300 QL-----AVLKVRLQEADQLLS 316
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.127 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,380,015
Number of Sequences: 37866
Number of extensions: 450264
Number of successful extensions: 2163
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 139
Number of HSP's that attempted gapping in prelim test: 2018
Number of HSP's gapped (non-prelim): 283
length of query: 218
length of database: 18,247,518
effective HSP length: 98
effective length of query: 120
effective length of database: 14,536,650
effective search space: 1744398000
effective search space used: 1744398000
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.