Guide to the Human Genome
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Name: GOLGA5 Sequence: fasta or formatted (731aa) NCBI GI: 30260188
Description:

Golgi autoantigen, golgin subfamily a, 5

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         50           2
 C cysteine            0.1          1           1
 D aspartate           4.9         36           2
 E glutamate          10.5         77           2
 F phenylalanine       2.1         15           1
 G glycine             3.6         26           1
 H histidine           2.3         17           2
 I isoleucine          4.0         29           2
 K lysine              6.8         50           2
 L leucine            10.7         78           2
 M methionine          2.3         17           1
 N asparagine          5.7         42           1
 P proline             2.2         16           1
 Q glutamine           8.3         61           3
 R arginine            6.2         45           2
 S serine             10.8         79           3
 T threonine           5.7         42           2
 V valine              4.4         32           1
 W tryptophan          0.4          3           1
 Y tyrosine            2.1         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Golgi autoantigen, golgin subfamily a, 5 
CENPF                 0.059   centromere protein F 
NUMA1                 0.052   nuclear mitotic apparatus protein 1 
MYH15                 0.050   myosin, heavy polypeptide 15 
MYH14                 0.050   myosin, heavy chain 14 isoform 1 
MYH14                 0.050   myosin, heavy chain 14 isoform 2 
MYH14                 0.050   myosin, heavy chain 14 isoform 3 
CEP250                0.048   centrosomal protein 2 
MYH4                  0.048   myosin, heavy polypeptide 4, skeletal muscle 
GOLGA3                0.048   Golgi autoantigen, golgin subfamily a, 3 
CCDC18                0.047   sarcoma antigen NY-SAR-41 
MYH10                 0.046   myosin, heavy polypeptide 10, non-muscle 
MYH1                  0.046   myosin, heavy chain 1, skeletal muscle, adult [Homo...
MYH9                  0.046   myosin, heavy polypeptide 9, non-muscle 
FAM184A               0.046   hypothetical protein LOC79632 isoform 2 
FAM184A               0.046   hypothetical protein LOC79632 isoform 1 
EEA1                  0.045   early endosome antigen 1, 162kD 
MYH2                  0.045   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.045   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH7                  0.045   myosin, heavy chain 7, cardiac muscle, beta 
AKAP9                 0.045   A-kinase anchor protein 9 isoform 2 
AKAP9                 0.045   A-kinase anchor protein 9 isoform 3 
MYH11                 0.045   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.045   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.045   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.045   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
GOLGB1                0.045   golgi autoantigen, golgin subfamily b, macrogolgin ...
CEP110                0.045   centrosomal protein 110kDa 
GOLGA4                0.044   golgi autoantigen, golgin subfamily a, 4 
MYH13                 0.044   myosin, heavy polypeptide 13, skeletal muscle [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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