CCDC46 36411

Name: CCDC46	Sequence: fasta or formatted (955aa)		NCBI GI: 82880656
Description: coiled-coil domain containing 46 isoform a		Referenced in: Coiled-Coil Proteins
Other entries for this name: alt prot [211aa] coiled-coil domain containing 46 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.2 50 2 C cysteine 0.9 9 1 D aspartate 4.3 41 2 E glutamate 14.2 136 3 F phenylalanine 1.8 17 1 G glycine 2.1 20 1 H histidine 3.2 31 1 I isoleucine 4.5 43 2 K lysine 11.0 105 2 L leucine 11.3 108 3 M methionine 2.4 23 2 N asparagine 4.2 40 2 P proline 2.1 20 1 Q glutamine 9.1 87 3 R arginine 6.2 59 2 S serine 6.3 60 3 T threonine 4.5 43 2 V valine 3.9 37 2 W tryptophan 0.7 7 1 Y tyrosine 2.0 19 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 46 isoform a CCDC46 0.150 coiled-coil domain containing 46 isoform b MYH9 0.063 myosin, heavy polypeptide 9, non-muscle GOLGA4 0.062 golgi autoantigen, golgin subfamily a, 4 CENPE 0.060 centromere protein E TCHH 0.057 trichohyalin MYH10 0.056 myosin, heavy polypeptide 10, non-muscle MYH3 0.056 myosin, heavy chain 3, skeletal muscle, embryonic [H... CIT 0.055 citron MYH11 0.055 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.055 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... MYH4 0.055 myosin, heavy polypeptide 4, skeletal muscle MYO18A 0.055 myosin 18A isoform a MYH13 0.055 myosin, heavy polypeptide 13, skeletal muscle [Homo... MYH1 0.055 myosin, heavy chain 1, skeletal muscle, adult [Homo... MYH2 0.055 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH2 0.055 myosin, heavy chain 2, skeletal muscle, adult [Homo... C14orf145 0.055 hypothetical protein LOC145508 CCDC88A 0.054 coiled-coil domain containing 88A isoform 2 EEA1 0.054 early endosome antigen 1, 162kD MYH11 0.054 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.054 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYO18A 0.054 myosin 18A isoform b CCDC88A 0.054 coiled-coil domain containing 88A isoform 1 MYH7 0.053 myosin, heavy chain 7, cardiac muscle, beta LOC727832 0.053 golgi autoantigen, golgin subfamily a-like AKAP9 0.053 A-kinase anchor protein 9 isoform 2 AKAP9 0.053 A-kinase anchor protein 9 isoform 3 FAM184B 0.053 hypothetical protein LOC27146 FAM184A 0.053 hypothetical protein LOC79632 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.