| Name: MCAM | Sequence: fasta or formatted (646aa) | NCBI GI: 71274107 | |
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Description: melanoma cell adhesion molecule
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Referenced in: Additional Immunoglobulin-related Receptors
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 5.0 32 2 C cysteine 2.6 17 4 D aspartate 3.3 21 1 E glutamate 9.8 63 3 F phenylalanine 1.9 12 1 G glycine 7.0 45 3 H histidine 1.5 10 1 I isoleucine 3.3 21 1 K lysine 5.0 32 2 L leucine 11.1 72 2 M methionine 1.1 7 1 N asparagine 4.0 26 1 P proline 7.1 46 3 Q glutamine 5.4 35 1 R arginine 6.2 40 2 S serine 7.7 50 2 T threonine 5.7 37 3 V valine 9.0 58 2 W tryptophan 1.1 7 1 Y tyrosine 2.3 15 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 melanoma cell adhesion molecule BCAM 0.155 basal cell adhesion molecule isoform 1 precursor [Ho... BCAM 0.147 basal cell adhesion molecule isoform 2 precursor [Ho... ALCAM 0.117 activated leukocyte cell adhesion molecule KIRREL 0.049 kin of IRRE like HMCN1 0.048 hemicentin 1 HSPG2 0.041 heparan sulfate proteoglycan 2 ROBO1 0.040 roundabout 1 isoform b ROBO1 0.039 roundabout 1 isoform d ROBO1 0.039 roundabout 1 isoform c LOC642132 0.039 PREDICTED: similar to roundabout 1 isoform 1 LOC642132 0.039 PREDICTED: similar to roundabout 1 isoform 2 KIRREL3 0.038 kin of IRRE like 3 isoform 2 KIRREL3 0.038 kin of IRRE like 3 isoform 1 HMCN2 0.037 PREDICTED: hemicentin 2 HMCN2 0.037 PREDICTED: hemicentin 2 ROBO1 0.036 roundabout 1 isoform a HMCN2 0.036 PREDICTED: hemicentin 2 AGER 0.035 advanced glycosylation end product-specific receptor... SIGLEC1 0.035 sialoadhesin precursor DSCAM 0.035 Down syndrome cell adhesion molecule isoform CHD2-42... PXDN 0.035 peroxidasin CADM4 0.035 cell adhesion molecule 4 AGER 0.035 advanced glycosylation end product-specific receptor... TTN 0.035 titin isoform N2-A LOC100292387 0.034 PREDICTED: similar to hemicentin 2 ROBO2 0.034 roundabout, axon guidance receptor, homolog 2 isofo... IGDCC3 0.034 putative neuronal cell adhesion molecule VCAM1 0.034 vascular cell adhesion molecule 1 isoform b precurso... ROBO2 0.033 roundabout, axon guidance receptor, homolog 2 isofor...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
