NYX 2402

Name: NYX	Sequence: fasta or formatted (481aa)		NCBI GI: 12007646
Description: nyctalopin precursor		Referenced in: Leucine-rich Repeat Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.3 59 2 C cysteine 3.1 15 2 D aspartate 4.2 20 1 E glutamate 4.8 23 2 F phenylalanine 4.6 22 2 G glycine 8.5 41 2 H histidine 2.1 10 1 I isoleucine 0.8 4 1 K lysine 0.6 3 1 L leucine 18.5 89 3 M methionine 0.8 4 1 N asparagine 4.0 19 2 P proline 5.0 24 1 Q glutamine 1.7 8 1 R arginine 10.4 50 2 S serine 7.5 36 3 T threonine 3.1 15 2 V valine 6.2 30 2 W tryptophan 1.5 7 1 Y tyrosine 0.4 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nyctalopin precursor LINGO3 0.127 leucine rich repeat and Ig domain containing 3 [Hom... CHAD 0.122 chondroadherin precursor LRRC70 0.122 synleurin LRRC15 0.118 leucine rich repeat containing 15 isoform a LRRC15 0.118 leucine rich repeat containing 15 isoform b KIAA0644 0.117 hypothetical protein LOC9865 GP5 0.116 glycoprotein V (platelet) CPN2 0.115 carboxypeptidase N, polypeptide 2, 83kD CHADL 0.115 chondroadherin-like LINGO1 0.114 leucine-rich repeat neuronal 6A LINGO2 0.109 leucine rich repeat and Ig domain containing 2 [Homo... LINGO4 0.108 leucine rich repeat and Ig domain containing 4 [Homo... RTN4R 0.103 reticulon 4 receptor precursor IGFALS 0.103 insulin-like growth factor binding protein, acid la... IGFALS 0.103 insulin-like growth factor binding protein, acid labi... LGR4 0.102 leucine-rich repeat-containing G protein-coupled re... RTN4RL2 0.098 reticulon 4 receptor-like 2 LRIG1 0.098 leucine-rich repeats and immunoglobulin-like domains... SLIT1 0.097 slit homolog 1 LRRTM4 0.095 leucine rich repeat transmembrane neuronal 4 isofor... LRRTM4 0.095 leucine rich repeat transmembrane neuronal 4 isofor... LRRC4B 0.093 leucine rich repeat containing 4B LRRC4C 0.093 netrin-G1 ligand SLIT3 0.092 slit homolog 3 LRRN2 0.091 leucine rich repeat neuronal 2 LRRN2 0.091 leucine rich repeat neuronal 2 LGR6 0.090 leucine-rich repeat-containing G protein-coupled rec... LRIG3 0.089 leucine-rich repeats and immunoglobulin-like domains... LRRC24 0.089 leucine rich repeat containing 24 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.