Guide to the Human Genome
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Name: LHCGR Sequence: fasta or formatted (699aa) NCBI GI: 106067657
Description:

luteinizing hormone/choriogonadotropin receptor precursor

Referenced in:

Organs and Hormones
Leucine-rich Repeat Family
Ovary, Uterus and Placenta
Peptide and Protein G-coupled Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         45           2
 C cysteine            3.6         25           2
 D aspartate           2.9         20           1
 E glutamate           4.7         33           2
 F phenylalanine       6.3         44           2
 G glycine             4.4         31           2
 H histidine           1.6         11           1
 I isoleucine          7.0         49           2
 K lysine              5.6         39           2
 L leucine            13.6         95           5
 M methionine          2.3         16           1
 N asparagine          5.6         39           2
 P proline             4.7         33           2
 Q glutamine           2.9         20           1
 R arginine            4.1         29           2
 S serine              7.9         55           2
 T threonine           7.4         52           2
 V valine              4.6         32           2
 W tryptophan          0.7          5           1
 Y tyrosine            3.7         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   luteinizing hormone/choriogonadotropin receptor pre... 
FSHR                  0.477   follicle stimulating hormone receptor isoform 1 prec...
TSHR                  0.476   thyroid stimulating hormone receptor isoform 1 precu...
FSHR                  0.392   follicle stimulating hormone receptor isoform 2 prec...
LGR5                  0.125   leucine-rich repeat-containing G protein-coupled rece...
LGR4                  0.125   leucine-rich repeat-containing G protein-coupled re...
RXFP1                 0.104   relaxin/insulin-like family peptide receptor 1 [Homo...
TSHR                  0.102   thyroid stimulating hormone receptor isoform 3 prec...
TSHR                  0.102   thyroid stimulating hormone receptor isoform 2 precu...
RXFP2                 0.093   relaxin/insulin-like family peptide receptor 2 [Homo...
LGR6                  0.090   leucine-rich repeat-containing G protein-coupled rec...
LGR6                  0.088   leucine-rich repeat-containing G protein-coupled rec...
LGR6                  0.088   leucine-rich repeat-containing G protein-coupled rec...
NPY2R                 0.040   neuropeptide Y receptor Y2 
SSTR2                 0.038   somatostatin receptor 2 
OXTR                  0.034   oxytocin receptor 
OPN4                  0.033   opsin 4 isoform 1 
SSTR4                 0.032   somatostatin receptor 4 
SSTR1                 0.032   somatostatin receptor 1 
OPN3                  0.030   opsin 3 
NPY1R                 0.030   neuropeptide Y receptor Y1 
GPR1                  0.030   G protein-coupled receptor 1 
GPR1                  0.030   G protein-coupled receptor 1 
SSTR5                 0.030   somatostatin receptor 5 
NMBR                  0.029   neuromedin B receptor 
P2RY8                 0.029   G-protein coupled purinergic receptor P2Y8 
OR14A16               0.029   olfactory receptor, family 14, subfamily A, member 1...
OPN4                  0.029   opsin 4 isoform 2 
OR4D10                0.028   olfactory receptor, family 4, subfamily D, member 10...
TACR2                 0.027   tachykinin receptor 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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