Guide to the Human Genome
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Name: TSHR Sequence: fasta or formatted (764aa) NCBI GI: 64085121
Description:

thyroid stimulating hormone receptor isoform 1 precursor

Referenced in:

Organs and Hormones
Leucine-rich Repeat Family
Peptide and Protein G-coupled Signals
Thyroid and Thyroid Hormone Receptor

Other entries for this name:
alt prot [274aa] thyroid stimulating hormone receptor isoform 3 precursor
alt prot [253aa] thyroid stimulating hormone receptor isoform 2 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         40           1
 C cysteine            3.1         24           3
 D aspartate           4.7         36           1
 E glutamate           4.8         37           2
 F phenylalanine       5.5         42           2
 G glycine             4.3         33           2
 H histidine           2.5         19           1
 I isoleucine          6.8         52           2
 K lysine              5.5         42           2
 L leucine            13.0         99           3
 M methionine          2.5         19           1
 N asparagine          5.1         39           2
 P proline             4.7         36           2
 Q glutamine           3.9         30           2
 R arginine            3.5         27           1
 S serine              6.8         52           2
 T threonine           6.4         49           1
 V valine              6.2         47           2
 W tryptophan          0.7          5           1
 Y tyrosine            4.7         36           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   thyroid stimulating hormone receptor isoform 1 precu... 
LHCGR                 0.431   luteinizing hormone/choriogonadotropin receptor pre...
FSHR                  0.397   follicle stimulating hormone receptor isoform 1 prec...
TSHR                  0.292   thyroid stimulating hormone receptor isoform 3 prec...
FSHR                  0.292   follicle stimulating hormone receptor isoform 2 prec...
TSHR                  0.292   thyroid stimulating hormone receptor isoform 2 precu...
LGR5                  0.108   leucine-rich repeat-containing G protein-coupled rece...
LGR4                  0.102   leucine-rich repeat-containing G protein-coupled re...
LGR6                  0.083   leucine-rich repeat-containing G protein-coupled rec...
LGR6                  0.083   leucine-rich repeat-containing G protein-coupled rec...
RXFP1                 0.079   relaxin/insulin-like family peptide receptor 1 [Homo...
LGR6                  0.077   leucine-rich repeat-containing G protein-coupled rec...
RXFP2                 0.070   relaxin/insulin-like family peptide receptor 2 [Homo...
SSTR2                 0.033   somatostatin receptor 2 
SSTR1                 0.031   somatostatin receptor 1 
P2RY8                 0.031   G-protein coupled purinergic receptor P2Y8 
NMBR                  0.031   neuromedin B receptor 
GPR183                0.031   EBV-induced G protein-coupled receptor 2 
MTNR1A                0.030   melatonin receptor 1A 
HTR4                  0.029   serotonin 5-HT4 receptor isoform b 
HTR4                  0.029   serotonin 5-HT4 receptor isoform n 
HTR4                  0.029   serotonin 5-HT4 receptor isoform i 
HTR4                  0.029   serotonin 5-HT4 receptor isoform d 
HTR4                  0.029   serotonin 5-HT4 receptor isoform a 
TACR3                 0.029   tachykinin receptor 3 
HTR4                  0.028   serotonin 5-HT4 receptor isoform g 
CMKLR1                0.028   chemokine-like receptor 1 isoform a 
CMKLR1                0.028   chemokine-like receptor 1 isoform a 
CMKLR1                0.028   chemokine-like receptor 1 isoform a 
CMKLR1                0.028   chemokine-like receptor 1 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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