Guide to the Human Genome
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Name: ABCC4 Sequence: fasta or formatted (859aa) NCBI GI: 157502203
Description:

ATP-binding cassette, sub-family C, member 4 isoform 2

Referenced in:

ATP-binding Cassette Proteins

Other entries for this name:
alt prot [1325aa] ATP-binding cassette, sub-family C, member 4 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         59           2
 C cysteine            1.3         11           1
 D aspartate           4.3         37           2
 E glutamate           4.7         40           2
 F phenylalanine       5.2         45           2
 G glycine             5.7         49           3
 H histidine           1.9         16           2
 I isoleucine          6.5         56           2
 K lysine              5.6         48           2
 L leucine            13.3        114           3
 M methionine          2.0         17           1
 N asparagine          4.0         34           1
 P proline             3.1         27           2
 Q glutamine           4.2         36           2
 R arginine            4.9         42           2
 S serine              7.8         67           2
 T threonine           5.7         49           3
 V valine              7.8         67           2
 W tryptophan          2.0         17           2
 Y tyrosine            3.3         28           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATP-binding cassette, sub-family C, member 4 isofor... 
ABCC4                 0.983   ATP-binding cassette, sub-family C, member 4 isofor...
ABCC1                 0.252   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC1                 0.252   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC2                 0.250   ATP-binding cassette, sub-family C (CFTR/MRP), member...
ABCC12                0.247   ATP-binding cassette protein C12 
ABCC3                 0.247   ATP-binding cassette, sub-family C, member 3 isoform ...
CFTR                  0.232   cystic fibrosis transmembrane conductance regulator ...
ABCC11                0.219   ATP-binding cassette, sub-family C, member 11 isofor...
ABCC11                0.219   ATP-binding cassette, sub-family C, member 11 isofor...
ABCC11                0.219   ATP-binding cassette, sub-family C, member 11 isofor...
ABCC10                0.206   ATP-binding cassette, sub-family C, member 10 
ABCC9                 0.203   ATP-binding cassette, sub-family C, member 9 isofor...
ABCC6                 0.201   ATP-binding cassette, sub-family C, member 6 isofor...
LOC100292715          0.201   PREDICTED: hypothetical protein 
ABCC9                 0.197   ATP-binding cassette, sub-family C, member 9 isofor...
ABCC9                 0.197   ATP-binding cassette, sub-family C, member 9 isofor...
ABCC1                 0.188   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC8                 0.183   ATP-binding cassette, sub-family C, member 8 
ABCC1                 0.177   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC5                 0.153   ATP-binding cassette, sub-family C, member 5 isoform...
ABCC1                 0.128   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC3                 0.095   ATP-binding cassette, sub-family C, member 3 isofor...
ABCB10                0.065   ATP-binding cassette, sub-family B, member 10 [Homo...
ABCB1                 0.062   ATP-binding cassette, subfamily B, member 1 
ABCB8                 0.062   ATP-binding cassette, sub-family B, member 8 
ABCB9                 0.062   ATP-binding cassette, sub-family B (MDR/TAP), member ...
ABCB9                 0.062   ATP-binding cassette, sub-family B (MDR/TAP), member...
ABCB6                 0.058   ATP-binding cassette, sub-family B, member 6 
ABCB11                0.057   ATP-binding cassette, sub-family B (MDR/TAP), member...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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