Guide to the Human Genome
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Name: ABCC12 Sequence: fasta or formatted (1359aa) NCBI GI: 89111135
Description:

ATP-binding cassette protein C12

Referenced in:

ATP-binding Cassette Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         94           2
 C cysteine            1.8         25           1
 D aspartate           4.2         57           2
 E glutamate           5.7         78           2
 F phenylalanine       5.2         71           2
 G glycine             5.7         78           2
 H histidine           2.1         29           1
 I isoleucine          6.2         84           2
 K lysine              5.4         74           2
 L leucine            12.0        163           3
 M methionine          2.8         38           1
 N asparagine          3.0         41           1
 P proline             3.8         52           2
 Q glutamine           3.7         50           2
 R arginine            5.4         74           3
 S serine              7.3         99           3
 T threonine           6.7         91           2
 V valine              8.2        111           2
 W tryptophan          1.3         18           2
 Y tyrosine            2.4         32           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATP-binding cassette protein C12 
ABCC11                0.471   ATP-binding cassette, sub-family C, member 11 isofor...
ABCC11                0.471   ATP-binding cassette, sub-family C, member 11 isofor...
ABCC11                0.443   ATP-binding cassette, sub-family C, member 11 isofor...
ABCC5                 0.423   ATP-binding cassette, sub-family C, member 5 isoform...
ABCC4                 0.276   ATP-binding cassette, sub-family C, member 4 isofor...
ABCC1                 0.261   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC2                 0.253   ATP-binding cassette, sub-family C (CFTR/MRP), member...
ABCC3                 0.242   ATP-binding cassette, sub-family C, member 3 isoform ...
ABCC1                 0.225   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC1                 0.222   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC1                 0.220   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC8                 0.214   ATP-binding cassette, sub-family C, member 8 
ABCC9                 0.210   ATP-binding cassette, sub-family C, member 9 isofor...
ABCC6                 0.210   ATP-binding cassette, sub-family C, member 6 isofor...
LOC100292715          0.210   PREDICTED: hypothetical protein 
ABCC10                0.207   ATP-binding cassette, sub-family C, member 10 
ABCC9                 0.204   ATP-binding cassette, sub-family C, member 9 isofor...
ABCC9                 0.201   ATP-binding cassette, sub-family C, member 9 isofor...
ABCC4                 0.156   ATP-binding cassette, sub-family C, member 4 isofor...
ABCC1                 0.152   ATP-binding cassette, sub-family C, member 1 isofor...
CFTR                  0.096   cystic fibrosis transmembrane conductance regulator ...
ABCB1                 0.081   ATP-binding cassette, subfamily B, member 1 
ABCB4                 0.074   ATP-binding cassette, subfamily B, member 4 isoform C...
ABCB5                 0.062   ATP-binding cassette, sub-family B, member 5 
ABCB10                0.053   ATP-binding cassette, sub-family B, member 10 [Homo...
ABCB7                 0.048   ATP-binding cassette, sub-family B, member 7 
ABCB4                 0.047   ATP-binding cassette, subfamily B, member 4 isoform B...
ABCB4                 0.047   ATP-binding cassette, subfamily B, member 4 isoform A...
ABCB11                0.046   ATP-binding cassette, sub-family B (MDR/TAP), member...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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