Guide to the Human Genome
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Name: HNRNPA1L2 Sequence: fasta or formatted (320aa) NCBI GI: 58761498
Description:

heterogeneous nuclear ribonucleoprotein A1-like

Referenced in:

hnRNP

Other entries for this name:
alt mRNA [320aa] heterogeneous nuclear ribonucleoprotein A1-like
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.4         11           2
 C cysteine            0.9          3           1
 D aspartate           5.6         18           2
 E glutamate           5.3         17           2
 F phenylalanine       6.9         22           1
 G glycine            19.7         63           4
 H histidine           2.5          8           2
 I isoleucine          2.5          8           1
 K lysine              5.9         19           2
 L leucine             2.5          8           1
 M methionine          1.9          6           1
 N asparagine          5.3         17           2
 P proline             3.1         10           1
 Q glutamine           3.4         11           1
 R arginine            6.9         22           2
 S serine             10.0         32           6
 T threonine           4.4         14           2
 V valine              5.6         18           2
 W tryptophan          0.3          1           1
 Y tyrosine            3.8         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   heterogeneous nuclear ribonucleoprotein A1-like [Hom... 
HNRNPA1L2             1.000   heterogeneous nuclear ribonucleoprotein A1-like [Hom...
HNRNPA1               0.961   heterogeneous nuclear ribonucleoprotein A1 isoform a ...
HNRNPA1               0.924   heterogeneous nuclear ribonucleoprotein A1 isoform b...
LOC120364             0.823   PREDICTED: similar to heterogeneous nuclear ribonucl...
LOC120364             0.823   PREDICTED: similar to heterogeneous nuclear ribonucl...
LOC120364             0.820   PREDICTED: similar to heterogeneous nuclear ribonuc...
HNRNPA3               0.667   heterogeneous nuclear ribonucleoprotein A3 
HNRNPA2B1             0.600   heterogeneous nuclear ribonucleoprotein A2/B1 isofor...
HNRNPA2B1             0.600   heterogeneous nuclear ribonucleoprotein A2/B1 isoform...
HNRNPA0               0.422   heterogeneous nuclear ribonucleoprotein A0 
HNRNPD                0.267   heterogeneous nuclear ribonucleoprotein D isoform b ...
HNRNPD                0.264   heterogeneous nuclear ribonucleoprotein D isoform a ...
HNRPDL                0.262   heterogeneous nuclear ribonucleoprotein D-like [Homo...
HNRNPAB               0.259   heterogeneous nuclear ribonucleoprotein A/B isoform ...
HNRNPAB               0.239   heterogeneous nuclear ribonucleoprotein A/B isoform ...
HNRNPD                0.225   heterogeneous nuclear ribonucleoprotein D isoform d ...
HNRNPD                0.220   heterogeneous nuclear ribonucleoprotein D isoform c ...
MSI1                  0.211   musashi 1 
MSI2                  0.209   musashi 2 isoform a 
MSI2                  0.203   musashi 2 isoform b 
LOC100294395          0.189   PREDICTED: similar to serum response factor-related...
DAZAP1                0.183   DAZ associated protein 1 isoform a 
DAZAP1                0.183   DAZ associated protein 1 isoform b 
TARDBP                0.140   TAR DNA binding protein 
NCL                   0.119   nucleolin 
TAF15                 0.110   TBP-associated factor 15 isoform 2 
TAF15                 0.110   TBP-associated factor 15 isoform 1 
CIRBP                 0.110   cold inducible RNA binding protein 
KRT9                  0.095   keratin 9 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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