Guide to the Human Genome
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Name: HEATR2 Sequence: fasta or formatted (855aa) NCBI GI: 157388904
Description:

HEAT repeat containing 2

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.5        107           3
 C cysteine            2.7         23           1
 D aspartate           5.1         44           2
 E glutamate           6.4         55           2
 F phenylalanine       2.1         18           2
 G glycine             4.3         37           2
 H histidine           3.3         28           1
 I isoleucine          3.0         26           2
 K lysine              2.8         24           2
 L leucine            16.0        137           3
 M methionine          1.3         11           1
 N asparagine          1.2         10           1
 P proline             6.1         52           2
 Q glutamine           4.8         41           1
 R arginine            6.9         59           3
 S serine              6.4         55           2
 T threonine           4.9         42           2
 V valine              7.6         65           2
 W tryptophan          1.2         10           1
 Y tyrosine            1.3         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   HEAT repeat containing 2 
GCN1L1                0.015   GCN1 general control of amino-acid synthesis 1-like ...
PPP2R1B               0.010   beta isoform of regulatory subunit A, protein phosph...
PPP2R1B               0.010   beta isoform of regulatory subunit A, protein phosph...
SF3B1                 0.008   splicing factor 3b, subunit 1 isoform 1 
PPP2R1A               0.006   alpha isoform of regulatory subunit A, protein phosp...
KIAA0368              0.006   KIAA0368 protein 
APC2                  0.005   adenomatosis polyposis coli 2 
C9orf96               0.005   hypothetical protein LOC169436 
MMS19                 0.005   MMS19 nucleotide excision repair homolog 
TNPO2                 0.005   transportin 2 (importin 3, karyopherin beta 2b) iso...
TNPO2                 0.005   transportin 2 (importin 3, karyopherin beta 2b) iso...
TNPO2                 0.005   transportin 2 (importin 3, karyopherin beta 2b) isof...
RNF31                 0.005   ring finger protein 31 
EPPK1                 0.005   epiplakin 1 
CTF1                  0.004   cardiotrophin 1 isoform 2 
CTF1                  0.004   cardiotrophin 1 isoform 1 
LOC645781             0.004   PREDICTED: similar to mCG141871 
LOC645781             0.004   PREDICTED: similar to mCG141871 
LOC100292143          0.004   PREDICTED: hypothetical protein 
LOC100132261          0.004   PREDICTED: similar to hCG2023245 
LOC100286967          0.004   PREDICTED: hypothetical protein XP_002342247 
TRRAP                 0.004   transformation/transcription domain-associated protei...
TNPO1                 0.004   transportin 1 isoform 2 
TNPO1                 0.004   transportin 1 isoform 1 
ANKRD43               0.004   ankyrin repeat domain 43 
SEPT9                 0.004   septin 9 isoform e 
SEPT9                 0.004   septin 9 isoform b 
SEPT9                 0.004   septin 9 isoform e 
SEPT9                 0.004   septin 9 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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