MMS19 9444

Name: MMS19	Sequence: fasta or formatted (1030aa)		NCBI GI: 170763479
Description: MMS19 nucleotide excision repair homolog		Referenced in: DNases, Recombination, and DNA Repair
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.3 96 5 C cysteine 2.9 30 2 D aspartate 4.6 47 2 E glutamate 5.7 59 3 F phenylalanine 4.0 41 2 G glycine 4.2 43 1 H histidine 3.0 31 2 I isoleucine 2.6 27 2 K lysine 3.6 37 2 L leucine 16.9 174 3 M methionine 1.8 19 1 N asparagine 2.3 24 1 P proline 6.1 63 3 Q glutamine 5.5 57 2 R arginine 4.9 50 2 S serine 8.3 86 3 T threonine 4.1 42 2 V valine 8.0 82 2 W tryptophan 0.8 8 1 Y tyrosine 1.4 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 MMS19 nucleotide excision repair homolog HEATR5A 0.007 HEAT repeat containing 5A DEPDC1 0.005 DEP domain containing 1 isoform a DEPDC1 0.005 DEP domain containing 1 isoform b GCN1L1 0.004 GCN1 general control of amino-acid synthesis 1-like ... HEATR2 0.004 HEAT repeat containing 2 KPNA3 0.004 karyopherin alpha 3 TNPO1 0.003 transportin 1 isoform 2 TNPO1 0.003 transportin 1 isoform 1 HEATR5B 0.003 HEAT repeat containing 5B CDC37L1 0.003 cell division cycle 37 homolog (S. cerevisiae)-like ... CAND1 0.003 TIP120 protein LOC731075 0.003 PREDICTED: hypothetical protein LOC731075 0.003 PREDICTED: hypothetical protein ARMC9 0.003 armadillo repeat containing 9 TSC2 0.003 tuberous sclerosis 2 isoform 4 TSC2 0.003 tuberous sclerosis 2 isoform 1 TSC2 0.003 tuberous sclerosis 2 isoform 5 NOC4L 0.003 nucleolar complex associated 4 homolog MRC2 0.002 mannose receptor, C type 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.