Guide to the Human Genome
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Name: PPP2R1A Sequence: fasta or formatted (589aa) NCBI GI: 21361399
Description:

alpha isoform of regulatory subunit A, protein phosphatase 2

Referenced in:

Serine / Threonine Protein Phosphatases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.7         57           3
 C cysteine            2.4         14           1
 D aspartate           6.1         36           2
 E glutamate           8.0         47           2
 F phenylalanine       3.1         18           2
 G glycine             3.4         20           2
 H histidine           1.9         11           1
 I isoleucine          5.3         31           2
 K lysine              5.4         32           2
 L leucine            13.8         81           2
 M methionine          2.4         14           1
 N asparagine          3.6         21           1
 P proline             4.4         26           2
 Q glutamine           3.6         21           1
 R arginine            4.6         27           2
 S serine              6.6         39           2
 T threonine           4.6         27           2
 V valine              8.8         52           2
 W tryptophan          0.8          5           1
 Y tyrosine            1.7         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   alpha isoform of regulatory subunit A, protein phosp... 
PPP2R1B               0.868   beta isoform of regulatory subunit A, protein phosph...
PPP2R1B               0.864   beta isoform of regulatory subunit A, protein phosph...
PPP4R1                0.043   protein phosphatase 4, regulatory subunit 1 isoform b...
PPP4R1                0.043   protein phosphatase 4, regulatory subunit 1 isoform...
PPP4R4                0.041   HEAT-like repeat-containing protein isoform 1 
GCN1L1                0.026   GCN1 general control of amino-acid synthesis 1-like ...
SF3B1                 0.022   splicing factor 3b, subunit 1 isoform 1 
PIK3R4                0.014   phosphoinositide-3-kinase, regulatory subunit 4 [Hom...
KPNB1                 0.014   karyopherin beta 1 
CAND2                 0.011   TBP-interacting protein isoform 1 
STK36                 0.011   serine/threonine kinase 36 
HTT                   0.010   huntingtin 
TNPO1                 0.010   transportin 1 isoform 2 
TNPO1                 0.010   transportin 1 isoform 1 
HEATR2                0.009   HEAT repeat containing 2 
KIAA1468              0.009   hypothetical protein LOC57614 
CAND2                 0.008   TBP-interacting protein isoform 2 
FAM179B               0.008   hypothetical protein LOC23116 
PCIF1                 0.008   phosphorylated CTD interacting factor 1 
IPO4                  0.008   importin 4 
INTS4                 0.008   integrator complex subunit 4 
TNPO2                 0.007   transportin 2 (importin 3, karyopherin beta 2b) iso...
TNPO2                 0.007   transportin 2 (importin 3, karyopherin beta 2b) isof...
TNPO2                 0.006   transportin 2 (importin 3, karyopherin beta 2b) iso...
SCYL1                 0.006   SCY1-like 1 isoform B 
SCYL1                 0.006   SCY1-like 1 isoform A 
RTDR1                 0.006   rhabdoid tumor deletion region protein 1 
OR13C3                0.006   olfactory receptor, family 13, subfamily C, member 3...
DPH2                  0.005   diphthamide biosynthesis protein 2 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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