TNPO1 16006

Name: TNPO1	Sequence: fasta or formatted (890aa)		NCBI GI: 23510381
Description: transportin 1 isoform 2		Referenced in: Nucleus and Nucleolus
Other entries for this name: alt prot [898aa] transportin 1 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 54 3 C cysteine 2.9 26 1 D aspartate 7.2 64 5 E glutamate 7.0 62 3 F phenylalanine 3.9 35 2 G glycine 3.8 34 2 H histidine 2.2 20 2 I isoleucine 7.4 66 2 K lysine 4.9 44 2 L leucine 12.9 115 2 M methionine 2.9 26 1 N asparagine 4.7 42 2 P proline 5.6 50 2 Q glutamine 5.6 50 2 R arginine 3.9 35 2 S serine 5.3 47 2 T threonine 4.0 36 2 V valine 5.6 50 2 W tryptophan 1.3 12 1 Y tyrosine 2.5 22 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transportin 1 isoform 2 TNPO1 1.000 transportin 1 isoform 1 TNPO2 0.866 transportin 2 (importin 3, karyopherin beta 2b) iso... TNPO2 0.866 transportin 2 (importin 3, karyopherin beta 2b) isof... TNPO2 0.862 transportin 2 (importin 3, karyopherin beta 2b) iso... KPNB1 0.052 karyopherin beta 1 IPO5 0.029 importin 5 RANBP6 0.025 RAN binding protein 6 IPO4 0.024 importin 4 CSE1L 0.016 CSE1 chromosome segregation 1-like protein IPO11 0.012 Ran binding protein 11 isoform 1 IPO11 0.012 Ran binding protein 11 isoform 2 IPO9 0.009 importin 9 KIAA0368 0.009 KIAA0368 protein HRC 0.008 histidine rich calcium binding protein precursor [Hom... ATAD2 0.008 ATPase family, AAA domain containing 2 NRD1 0.008 nardilysin isoform b CAND1 0.007 TIP120 protein KPNA6 0.007 karyopherin alpha 6 NCL 0.007 nucleolin UBTF 0.007 upstream binding transcription factor, RNA polymera... UBTF 0.007 upstream binding transcription factor, RNA polymera... UBTF 0.007 upstream binding transcription factor, RNA polymerase... KPNA5 0.007 karyopherin alpha 5 KPNA4 0.007 karyopherin alpha 4 XPO1 0.006 exportin 1 LOC645490 0.006 PREDICTED: similar to hCG1991922 NRD1 0.006 nardilysin isoform a PPP2R1A 0.006 alpha isoform of regulatory subunit A, protein phosp... CAND2 0.006 TBP-interacting protein isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.