CTF1 13513

Name: CTF1	Sequence: fasta or formatted (200aa)		NCBI GI: 216548056
Description: cardiotrophin 1 isoform 2		Referenced in: Cardiovascular System
Other entries for this name: alt prot [201aa] cardiotrophin 1 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 17.5 35 3 C cysteine 1.0 2 1 D aspartate 3.5 7 1 E glutamate 5.5 11 1 F phenylalanine 1.5 3 1 G glycine 7.5 15 2 H histidine 2.5 5 1 I isoleucine 0.5 1 1 K lysine 1.5 3 1 L leucine 17.5 35 2 M methionine 0.5 1 1 N asparagine 1.0 2 1 P proline 9.5 19 2 Q glutamine 4.5 9 1 R arginine 9.5 19 2 S serine 7.0 14 2 T threonine 3.0 6 1 V valine 4.5 9 1 W tryptophan 0.5 1 1 Y tyrosine 1.5 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cardiotrophin 1 isoform 2 CTF1 0.986 cardiotrophin 1 isoform 1 CDKN1C 0.035 cyclin-dependent kinase inhibitor 1C isoform b [Hom... CDKN1C 0.035 cyclin-dependent kinase inhibitor 1C isoform b [Hom... CDKN1C 0.035 cyclin-dependent kinase inhibitor 1C isoform a C8orf73 0.030 hypothetical protein LOC642475 CLCF1 0.027 cardiotrophin-like cytokine factor 1 LOC100288822 0.027 PREDICTED: hypothetical protein XP_002343515 IL17RE 0.025 interleukin 17 receptor E isoform 1 IL17RE 0.025 interleukin 17 receptor E isoform 2 IL17RE 0.025 interleukin 17 receptor E isoform 1 LOC100292183 0.022 PREDICTED: hypothetical protein isoform 1 LOC100287716 0.022 PREDICTED: hypothetical protein XP_002343734 SALL3 0.022 sal-like 3 ZNF367 0.022 zinc finger protein 367 SAMD1 0.022 sterile alpha motif domain containing 1 TH 0.022 tyrosine hydroxylase isoform a PHLDB1 0.019 pleckstrin homology-like domain, family B, member 1... PHLDB1 0.019 pleckstrin homology-like domain, family B, member 1... PHLDB1 0.019 pleckstrin homology-like domain, family B, member 1 ... FAM181B 0.019 hypothetical protein LOC220382 LOC100293902 0.019 PREDICTED: similar to hCG1986016 HEATR2 0.019 HEAT repeat containing 2 CARTPT 0.019 cocaine- and amphetamine-regulated transcript LOC100290409 0.019 PREDICTED: hypothetical protein XP_002347745 PRX 0.019 periaxin isoform 2 TH 0.016 tyrosine hydroxylase isoform c WWC1 0.016 WW and C2 domain containing 1 isoform 3 WWC1 0.016 WW and C2 domain containing 1 isoform 2 WWC1 0.016 WW and C2 domain containing 1 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.