Guide to the Human Genome
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Name: SEPT9 Sequence: fasta or formatted (422aa) NCBI GI: 164698496
Description:

septin 9 isoform e

Referenced in:

Additional Cell Cycle Functions

Other entries for this name:
alt prot [568aa] septin 9 isoform c
alt prot [586aa] septin 9 isoform a
alt prot [579aa] septin 9 isoform b
alt mRNA [422aa] septin 9 isoform e
alt prot [474aa] septin 9 isoform d
alt prot [335aa] septin 9 isoform f
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         31           2
 C cysteine            1.2          5           2
 D aspartate           5.0         21           1
 E glutamate           9.7         41           2
 F phenylalanine       3.3         14           1
 G glycine             4.5         19           1
 H histidine           2.1          9           1
 I isoleucine          7.1         30           1
 K lysine              7.6         32           2
 L leucine             5.7         24           2
 M methionine          3.3         14           1
 N asparagine          4.3         18           2
 P proline             8.1         34           2
 Q glutamine           4.3         18           1
 R arginine            5.9         25           2
 S serine              5.9         25           2
 T threonine           5.9         25           2
 V valine              6.4         27           2
 W tryptophan          0.5          2           1
 Y tyrosine            1.9          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   septin 9 isoform e 
SEPT9                 1.000   septin 9 isoform e 
SEPT9                 1.000   septin 9 isoform b 
SEPT9                 1.000   septin 9 isoform a 
SEPT9                 1.000   septin 9 isoform c 
SEPT9                 0.818   septin 9 isoform d 
SEPT9                 0.790   septin 9 isoform f 
SEPT3                 0.519   septin 3 isoform B 
SEPT3                 0.519   septin 3 isoform A 
SEPT12                0.456   septin 12 isoform 2 
SEPT4                 0.345   septin 4 isoform 1 
SEPT4                 0.345   septin 4 isoform 3 
SEPT7                 0.342   cell division cycle 10 isoform 1 
SEPT7                 0.342   cell division cycle 10 isoform 2 
SEPT12                0.341   septin 12 isoform 1 
SEPT5                 0.337   septin 5 
SEPT2                 0.322   septin 2 
SEPT2                 0.322   septin 2 
SEPT2                 0.322   septin 2 
SEPT2                 0.322   septin 2 
SEPT1                 0.299   septin 1 
SEPT6                 0.286   septin 6 isoform B 
SEPT6                 0.286   septin 6 isoform D 
SEPT6                 0.286   septin 6 isoform A 
SEPT6                 0.286   septin 6 isoform A 
SEPT11                0.277   septin 11 
SEPT8                 0.275   septin 8 isoform c 
SEPT8                 0.275   septin 8 isoform a 
SEPT8                 0.275   septin 8 isoform b 
SEPT10                0.270   septin 10 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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