LOC100292143 22450

Name: LOC100292143	Sequence: fasta or formatted (261aa)		NCBI GI: 239755571
Description: PREDICTED: hypothetical protein		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.1 29 2 C cysteine 2.3 6 1 D aspartate 4.6 12 2 E glutamate 5.7 15 2 F phenylalanine 0.4 1 1 G glycine 15.7 41 2 H histidine 0.0 0 0 I isoleucine 0.0 0 0 K lysine 1.9 5 1 L leucine 5.7 15 3 M methionine 1.1 3 1 N asparagine 0.8 2 1 P proline 13.0 34 2 Q glutamine 3.4 9 2 R arginine 14.9 39 2 S serine 10.3 27 3 T threonine 3.8 10 1 V valine 3.8 10 1 W tryptophan 1.1 3 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC100132261 0.940 PREDICTED: similar to hCG2023245 LOC651856 0.594 PREDICTED: similar to hCG2023245 LOC728650 0.419 PREDICTED: hypothetical protein LOC100291206 0.173 PREDICTED: hypothetical protein XP_002347014 COL2A1 0.058 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.058 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL3A1 0.058 collagen type III alpha 1 preproprotein BSN 0.049 bassoon protein MLL2 0.049 myeloid/lymphoid or mixed-lineage leukemia 2 COL1A1 0.047 alpha 1 type I collagen preproprotein COL5A2 0.047 alpha 2 type V collagen preproprotein COL16A1 0.045 alpha 1 type XVI collagen precursor RXRB 0.043 retinoid X receptor, beta LOC100293375 0.043 PREDICTED: hypothetical protein SFPQ 0.043 splicing factor proline/glutamine rich (polypyrimidin... SMTN 0.043 smoothelin isoform b SMTN 0.043 smoothelin isoform c SMTN 0.043 smoothelin isoform a LOC338758 0.043 PREDICTED: hypothetical protein LOC338758 0.043 PREDICTED: hypothetical protein LOC338758 0.043 PREDICTED: hypothetical protein COL11A2 0.041 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.041 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.041 collagen, type XI, alpha 2 isoform 1 preproprotein ... FLJ37078 0.041 hypothetical protein LOC222183 HDGF2 0.041 hepatoma-derived growth factor-related protein 2 iso... HDGF2 0.041 hepatoma-derived growth factor-related protein 2 iso... LOC100291624 0.041 PREDICTED: hypothetical protein XP_002345876 LOC100127891 0.041 PREDICTED: similar to hCG2042508 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.