Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 157168372

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|157168372 amyotrophic lateral sclerosis 2 (juvenile)
chromosome region, candidate 8 [Homo sapiens]
         (725 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|157168372 amyotrophic lateral sclerosis 2 (juvenile) chromoso...  1449   0.0  
gi|117956409 amyotrophic lateral sclerosis 2 (juvenile) chromoso...  1449   0.0  
gi|161019170 mucin 5AC [Homo sapiens]                                  36   0.11 
gi|31543535 R3H domain containing 1 [Homo sapiens]                     36   0.11 
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]     36   0.14 
gi|148596992 heart alpha-kinase [Homo sapiens]                         35   0.25 
gi|38569491 serine/threonine-protein kinase QSK [Homo sapiens]         35   0.32 
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]       34   0.42 
gi|45505139 phosphoinositide-3-kinase adaptor protein 1 [Homo sa...    34   0.55 
gi|105990535 coagulation factor V precursor [Homo sapiens]             33   0.71 
gi|31541941 heat shock 70kDa protein 4-like [Homo sapiens]             33   0.93 
gi|93004081 polo-like kinase 2 [Homo sapiens]                          33   1.2  
gi|225543461 tetratricopeptide repeat, ankyrin repeat and coiled...    32   1.6  
gi|7019405 host cell factor C2 [Homo sapiens]                          32   1.6  
gi|5292161 proteasome 26S non-ATPase subunit 4 [Homo sapiens]          32   2.1  
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]     32   2.7  
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]     32   2.7  
gi|71274144 AT hook, DNA binding motif, containing 1 [Homo sapiens]    32   2.7  
gi|50843837 hypothetical protein LOC55701 [Homo sapiens]               31   3.5  
gi|112363100 SLIT-ROBO Rho GTPase activating protein 2 isoform a...    31   3.5  
gi|112363096 SLIT-ROBO Rho GTPase activating protein 2 isoform b...    31   3.5  
gi|91982772 mucin 17 [Homo sapiens]                                    31   4.6  
gi|38093637 Nance-Horan syndrome protein isoform 1 [Homo sapiens]      30   6.0  
gi|209862849 Nance-Horan syndrome protein isoform 2 [Homo sapiens]     30   6.0  
gi|31657094 anillin, actin binding protein [Homo sapiens]              30   6.0  
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi...    30   7.9  
gi|239749217 PREDICTED: similar to Mucin-12, partial [Homo sapiens]    30   7.9  
gi|239743293 PREDICTED: mucin 12 [Homo sapiens]                        30   7.9  
gi|219802034 nuclear factor related to kappaB binding protein is...    30   7.9  
gi|23346420 nuclear factor related to kappaB binding protein iso...    30   7.9  

>gi|157168372 amyotrophic lateral sclerosis 2 (juvenile) chromosome
           region, candidate 8 [Homo sapiens]
          Length = 725

 Score = 1449 bits (3750), Expect = 0.0
 Identities = 725/725 (100%), Positives = 725/725 (100%)

Query: 1   MEQSNDSLRVNHNDGEESKTSAQVFEHLICMDSRDSSFGQNDSPTVLPITTREANNSLIS 60
           MEQSNDSLRVNHNDGEESKTSAQVFEHLICMDSRDSSFGQNDSPTVLPITTREANNSLIS
Sbjct: 1   MEQSNDSLRVNHNDGEESKTSAQVFEHLICMDSRDSSFGQNDSPTVLPITTREANNSLIS 60

Query: 61  QNIPGPLTQTQTLSAEQFHLVDQNGQAIQYELQSLGESNAQMMIVASPTENGQVLRVIPP 120
           QNIPGPLTQTQTLSAEQFHLVDQNGQAIQYELQSLGESNAQMMIVASPTENGQVLRVIPP
Sbjct: 61  QNIPGPLTQTQTLSAEQFHLVDQNGQAIQYELQSLGESNAQMMIVASPTENGQVLRVIPP 120

Query: 121 TQTGMAQVIIPQGQLVDVNSPRDVPEEKPSNRNLPTVRVDTLADNTSNYILHPQTSFPLP 180
           TQTGMAQVIIPQGQLVDVNSPRDVPEEKPSNRNLPTVRVDTLADNTSNYILHPQTSFPLP
Sbjct: 121 TQTGMAQVIIPQGQLVDVNSPRDVPEEKPSNRNLPTVRVDTLADNTSNYILHPQTSFPLP 180

Query: 181 KKSVTGMLEEPLLGPLQPLSSNTPIWACRLRSCEKIGDSYRGYCVSETELESVLTFHKQQ 240
           KKSVTGMLEEPLLGPLQPLSSNTPIWACRLRSCEKIGDSYRGYCVSETELESVLTFHKQQ
Sbjct: 181 KKSVTGMLEEPLLGPLQPLSSNTPIWACRLRSCEKIGDSYRGYCVSETELESVLTFHKQQ 240

Query: 241 TQSVWGTRQSPSPAKPATRLMWKSQYVPYDGIPFVNAGSRAVVMECQYGPRRKGFQLKKV 300
           TQSVWGTRQSPSPAKPATRLMWKSQYVPYDGIPFVNAGSRAVVMECQYGPRRKGFQLKKV
Sbjct: 241 TQSVWGTRQSPSPAKPATRLMWKSQYVPYDGIPFVNAGSRAVVMECQYGPRRKGFQLKKV 300

Query: 301 SEQESRSCQLYKATCPARIYIKKVQKFPEYRVPTDPKIDKKIIRMEQEKAFNMLKKNLVD 360
           SEQESRSCQLYKATCPARIYIKKVQKFPEYRVPTDPKIDKKIIRMEQEKAFNMLKKNLVD
Sbjct: 301 SEQESRSCQLYKATCPARIYIKKVQKFPEYRVPTDPKIDKKIIRMEQEKAFNMLKKNLVD 360

Query: 361 AGGVLRWYVQLPTQQAHQYHELETPCLTLSPSPFPVSSLEEEETAVRDENCALPSRLHPQ 420
           AGGVLRWYVQLPTQQAHQYHELETPCLTLSPSPFPVSSLEEEETAVRDENCALPSRLHPQ
Sbjct: 361 AGGVLRWYVQLPTQQAHQYHELETPCLTLSPSPFPVSSLEEEETAVRDENCALPSRLHPQ 420

Query: 421 VAHKIQELVSQGIEQVYAVRKQLRKFVERELFKPDEVPERHNLSFFPTVNDIKNHIHEVQ 480
           VAHKIQELVSQGIEQVYAVRKQLRKFVERELFKPDEVPERHNLSFFPTVNDIKNHIHEVQ
Sbjct: 421 VAHKIQELVSQGIEQVYAVRKQLRKFVERELFKPDEVPERHNLSFFPTVNDIKNHIHEVQ 480

Query: 481 KSLRNGDTVYNSEIIPATLQWTTDSGNILKETMTVTFAEGNSPGESITTKVETNQTRGSL 540
           KSLRNGDTVYNSEIIPATLQWTTDSGNILKETMTVTFAEGNSPGESITTKVETNQTRGSL
Sbjct: 481 KSLRNGDTVYNSEIIPATLQWTTDSGNILKETMTVTFAEGNSPGESITTKVETNQTRGSL 540

Query: 541 SPEPTHLLSSLSSFQPKIFTQLQGLQLQPRYTSPDESPAVVSVNNQPSSSPSGLLDTIGS 600
           SPEPTHLLSSLSSFQPKIFTQLQGLQLQPRYTSPDESPAVVSVNNQPSSSPSGLLDTIGS
Sbjct: 541 SPEPTHLLSSLSSFQPKIFTQLQGLQLQPRYTSPDESPAVVSVNNQPSSSPSGLLDTIGS 600

Query: 601 AVMNNNSLLLGQSHSLQRDTCLTQNNSTASTMGNLPEPDQNLVAMDELVEVGDVEDTGNL 660
           AVMNNNSLLLGQSHSLQRDTCLTQNNSTASTMGNLPEPDQNLVAMDELVEVGDVEDTGNL
Sbjct: 601 AVMNNNSLLLGQSHSLQRDTCLTQNNSTASTMGNLPEPDQNLVAMDELVEVGDVEDTGNL 660

Query: 661 EGTVHRILLGDVQTIPIQIIDNHSALIEENPESTISVSQVKQEPKEPALSMEAKKTVDYK 720
           EGTVHRILLGDVQTIPIQIIDNHSALIEENPESTISVSQVKQEPKEPALSMEAKKTVDYK
Sbjct: 661 EGTVHRILLGDVQTIPIQIIDNHSALIEENPESTISVSQVKQEPKEPALSMEAKKTVDYK 720

Query: 721 KLSAT 725
           KLSAT
Sbjct: 721 KLSAT 725


>gi|117956409 amyotrophic lateral sclerosis 2 (juvenile) chromosome
           region, candidate 8 [Homo sapiens]
          Length = 725

 Score = 1449 bits (3750), Expect = 0.0
 Identities = 725/725 (100%), Positives = 725/725 (100%)

Query: 1   MEQSNDSLRVNHNDGEESKTSAQVFEHLICMDSRDSSFGQNDSPTVLPITTREANNSLIS 60
           MEQSNDSLRVNHNDGEESKTSAQVFEHLICMDSRDSSFGQNDSPTVLPITTREANNSLIS
Sbjct: 1   MEQSNDSLRVNHNDGEESKTSAQVFEHLICMDSRDSSFGQNDSPTVLPITTREANNSLIS 60

Query: 61  QNIPGPLTQTQTLSAEQFHLVDQNGQAIQYELQSLGESNAQMMIVASPTENGQVLRVIPP 120
           QNIPGPLTQTQTLSAEQFHLVDQNGQAIQYELQSLGESNAQMMIVASPTENGQVLRVIPP
Sbjct: 61  QNIPGPLTQTQTLSAEQFHLVDQNGQAIQYELQSLGESNAQMMIVASPTENGQVLRVIPP 120

Query: 121 TQTGMAQVIIPQGQLVDVNSPRDVPEEKPSNRNLPTVRVDTLADNTSNYILHPQTSFPLP 180
           TQTGMAQVIIPQGQLVDVNSPRDVPEEKPSNRNLPTVRVDTLADNTSNYILHPQTSFPLP
Sbjct: 121 TQTGMAQVIIPQGQLVDVNSPRDVPEEKPSNRNLPTVRVDTLADNTSNYILHPQTSFPLP 180

Query: 181 KKSVTGMLEEPLLGPLQPLSSNTPIWACRLRSCEKIGDSYRGYCVSETELESVLTFHKQQ 240
           KKSVTGMLEEPLLGPLQPLSSNTPIWACRLRSCEKIGDSYRGYCVSETELESVLTFHKQQ
Sbjct: 181 KKSVTGMLEEPLLGPLQPLSSNTPIWACRLRSCEKIGDSYRGYCVSETELESVLTFHKQQ 240

Query: 241 TQSVWGTRQSPSPAKPATRLMWKSQYVPYDGIPFVNAGSRAVVMECQYGPRRKGFQLKKV 300
           TQSVWGTRQSPSPAKPATRLMWKSQYVPYDGIPFVNAGSRAVVMECQYGPRRKGFQLKKV
Sbjct: 241 TQSVWGTRQSPSPAKPATRLMWKSQYVPYDGIPFVNAGSRAVVMECQYGPRRKGFQLKKV 300

Query: 301 SEQESRSCQLYKATCPARIYIKKVQKFPEYRVPTDPKIDKKIIRMEQEKAFNMLKKNLVD 360
           SEQESRSCQLYKATCPARIYIKKVQKFPEYRVPTDPKIDKKIIRMEQEKAFNMLKKNLVD
Sbjct: 301 SEQESRSCQLYKATCPARIYIKKVQKFPEYRVPTDPKIDKKIIRMEQEKAFNMLKKNLVD 360

Query: 361 AGGVLRWYVQLPTQQAHQYHELETPCLTLSPSPFPVSSLEEEETAVRDENCALPSRLHPQ 420
           AGGVLRWYVQLPTQQAHQYHELETPCLTLSPSPFPVSSLEEEETAVRDENCALPSRLHPQ
Sbjct: 361 AGGVLRWYVQLPTQQAHQYHELETPCLTLSPSPFPVSSLEEEETAVRDENCALPSRLHPQ 420

Query: 421 VAHKIQELVSQGIEQVYAVRKQLRKFVERELFKPDEVPERHNLSFFPTVNDIKNHIHEVQ 480
           VAHKIQELVSQGIEQVYAVRKQLRKFVERELFKPDEVPERHNLSFFPTVNDIKNHIHEVQ
Sbjct: 421 VAHKIQELVSQGIEQVYAVRKQLRKFVERELFKPDEVPERHNLSFFPTVNDIKNHIHEVQ 480

Query: 481 KSLRNGDTVYNSEIIPATLQWTTDSGNILKETMTVTFAEGNSPGESITTKVETNQTRGSL 540
           KSLRNGDTVYNSEIIPATLQWTTDSGNILKETMTVTFAEGNSPGESITTKVETNQTRGSL
Sbjct: 481 KSLRNGDTVYNSEIIPATLQWTTDSGNILKETMTVTFAEGNSPGESITTKVETNQTRGSL 540

Query: 541 SPEPTHLLSSLSSFQPKIFTQLQGLQLQPRYTSPDESPAVVSVNNQPSSSPSGLLDTIGS 600
           SPEPTHLLSSLSSFQPKIFTQLQGLQLQPRYTSPDESPAVVSVNNQPSSSPSGLLDTIGS
Sbjct: 541 SPEPTHLLSSLSSFQPKIFTQLQGLQLQPRYTSPDESPAVVSVNNQPSSSPSGLLDTIGS 600

Query: 601 AVMNNNSLLLGQSHSLQRDTCLTQNNSTASTMGNLPEPDQNLVAMDELVEVGDVEDTGNL 660
           AVMNNNSLLLGQSHSLQRDTCLTQNNSTASTMGNLPEPDQNLVAMDELVEVGDVEDTGNL
Sbjct: 601 AVMNNNSLLLGQSHSLQRDTCLTQNNSTASTMGNLPEPDQNLVAMDELVEVGDVEDTGNL 660

Query: 661 EGTVHRILLGDVQTIPIQIIDNHSALIEENPESTISVSQVKQEPKEPALSMEAKKTVDYK 720
           EGTVHRILLGDVQTIPIQIIDNHSALIEENPESTISVSQVKQEPKEPALSMEAKKTVDYK
Sbjct: 661 EGTVHRILLGDVQTIPIQIIDNHSALIEENPESTISVSQVKQEPKEPALSMEAKKTVDYK 720

Query: 721 KLSAT 725
           KLSAT
Sbjct: 721 KLSAT 725


>gi|161019170 mucin 5AC [Homo sapiens]
          Length = 6207

 Score = 36.2 bits (82), Expect = 0.11
 Identities = 35/150 (23%), Positives = 61/150 (40%), Gaps = 22/150 (14%)

Query: 488  TVYNSEIIPATLQWTTDSGNILKETMTVTFAEGN------SPGESITTKVETNQTRGSLS 541
            T   S   P++   T  +  +L  T T T A G+      +PG + TTKV T  T G   
Sbjct: 5017 TATMSTATPSSTPETVHTSTVLTATATTTGATGSVATPSSTPGTAHTTKVPTTTTTG--- 5073

Query: 542  PEPTHLLSSLSSFQPKIFTQLQGLQLQPRYTSPDESPAVVSVNNQPSSSPSGLLDTIGSA 601
                   ++  S  P       G  L P  T+P  + + +  ++ P ++ +  + T  + 
Sbjct: 5074 ------FTATPSSSP-------GTALTPPTTTPMSTMSTIHTSSTPETTHTSTVLTTTAT 5120

Query: 602  VMNNNSLLLGQSHSLQRDTCLTQNNSTAST 631
            +    +     S +L     LT+  +TA+T
Sbjct: 5121 MTRATNSTATPSSTLGTTRILTELTTTATT 5150



 Score = 33.1 bits (74), Expect = 0.93
 Identities = 52/231 (22%), Positives = 84/231 (36%), Gaps = 42/231 (18%)

Query: 488  TVYNSEIIPATLQWTTDSGNILKETMTVTFAEGN------SPGESITTKVETNQTRGSLS 541
            T   S   P++   T  +  +L  T T T A G+      +PG + TTKV T  T G  +
Sbjct: 3842 TATMSTATPSSTPETVHTSTVLTTTTTTTRATGSVATPSSTPGTAHTTKVPTTTTTGFTA 3901

Query: 542  PEPTHLLSSLSSFQPKIFTQLQGLQLQPRYTSPDESPAVVSVNNQPSSSPSGLLDTIGSA 601
               T   S  ++  P ++            T+P    + V+ ++ P ++ +  + T  + 
Sbjct: 3902 ---TPSSSPGTALTPPVWISTT--------TTPTTRGSTVTPSSIPGTTHTATVLTTTTT 3950

Query: 602  VMNNNSLLLGQSHSLQRDTCLTQ--NNSTASTMGNLPEPDQNLVAMDELVEVGDVEDTGN 659
             +   S+    S +    T  T    N+TA+T G    P     +    V       T  
Sbjct: 3951 TVATGSMATPSSSTQTSGTTHTPPVPNTTATTHGRSLPP-----SSPHTVRTAWTSATSG 4005

Query: 660  LEGTVHRILLGDVQTIPIQIIDNHSALIEENPESTISVSQVKQEPKEPALS 710
            + GT H              I   S +    P +T S +Q       PALS
Sbjct: 4006 ILGTTH--------------ITEPSTVTSHTPAATTSTTQ----HSTPALS 4038



 Score = 31.6 bits (70), Expect = 2.7
 Identities = 38/160 (23%), Positives = 67/160 (41%), Gaps = 21/160 (13%)

Query: 488  TVYNSEIIPATLQWTTDSGNILKETMTVTFAEGN------SPGESITTKVETNQTRG-SL 540
            T   S   P++   T  +  +L  T T T A G+      +PG + TTKV T  T G ++
Sbjct: 4344 TATMSTATPSSTPETAHTSTVLTTTATTTRATGSVATPSSTPGTAHTTKVPTTTTTGFTV 4403

Query: 541  SPEPTHLLSSLSSFQPKIFTQLQGLQLQPRYTSPDESPAVVSVNNQPSSSPSGLLDTIGS 600
            +P      S  ++  P ++            T+P  S + V+ ++ P ++ +  + T  +
Sbjct: 4404 TPSS----SPGTARTPPVWISTT--------TTPTTSGSTVTPSSVPGTTHTPTVLTTTT 4451

Query: 601  AVMNNNSLLLGQSHSLQRDTCLTQ--NNSTASTMGNLPEP 638
              +   S+    S +    T  T    N+TA+T G    P
Sbjct: 4452 TTVATGSMATPSSSTQTSGTTHTPPVPNTTATTHGRSLSP 4491



 Score = 30.0 bits (66), Expect = 7.9
 Identities = 41/186 (22%), Positives = 70/186 (37%), Gaps = 24/186 (12%)

Query: 488  TVYNSEIIPATLQWTTDSGNILKETMTVTFAEGN------SPGESITTKVETNQTRGSLS 541
            T   S   P++   T  +  +L  T T T A G+      +PG + TTKV T  T G  +
Sbjct: 2695 TATMSTATPSSTPETAHTSTVLTATATTTGATGSVATPSSTPGTAHTTKVPTTTTTGFTA 2754

Query: 542  PEPTHLLSSLSSFQPKIFTQLQGLQLQPRYTSPDESPAVVSVNNQPSSSPSGLLDTIGSA 601
               T   S  ++  P ++            T+P    + V+ ++ P ++ +  + T  + 
Sbjct: 2755 ---TPSSSPGTALTPPVWISTT--------TTPTTRGSTVTPSSIPGTTHTATVLTTTTT 2803

Query: 602  VMNNNSLLLGQSHSLQRDTCLTQ--NNSTASTMGNLPEPDQNLVAMDELVEVGDVEDTGN 659
             +   S+    S +    T  T    N+ A+T G    P     +    V       T  
Sbjct: 2804 TVATGSMATPSSSTQTSGTTHTPPVPNTMATTHGRSLPP-----SSPHTVRTAWTSATSG 2858

Query: 660  LEGTVH 665
            + GT H
Sbjct: 2859 ILGTTH 2864


>gi|31543535 R3H domain containing 1 [Homo sapiens]
          Length = 1099

 Score = 36.2 bits (82), Expect = 0.11
 Identities = 58/246 (23%), Positives = 91/246 (36%), Gaps = 56/246 (22%)

Query: 56  NSLISQNIPGPLTQT--QTLSAEQFHLVDQNGQAIQYELQSLGESNAQMMIVASPTENGQ 113
           NS ++Q +P P  QT  Q +  +Q     QN Q I      + +  +Q ++   P   G 
Sbjct: 668 NSHLNQPLPQPAQQTGYQVIPNQQ-----QNYQGIV----GVQQPQSQSLVSGQPNSIGN 718

Query: 114 VLR--VIPPTQTGMAQVIIPQGQLVDVNSPRDVPEEKPSNRN---LPTVRVDTL------ 162
            ++  VIP T     QV +PQG     +     P   P+  N   +PT  +         
Sbjct: 719 QIQGVVIPYTSVPTYQVSLPQGSQGIPHQTYQQPVMFPNQSNQGSMPTTGMPVYYSVIPP 778

Query: 163 -----ADNTSNYILHP---QTSFPL-------------------PKKSVTGMLEEPLLGP 195
                  ++  Y+ HP   Q  FP                    P     GM+   L  P
Sbjct: 779 GQQNNLSSSVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCTAGPPPPPGGGMVMMQLSVP 838

Query: 196 LQPLSS--NTPIWACRLRSCEKIGDSYRGY-CVSETELESVLTFHKQQTQSVWGTRQSPS 252
             P S   + P W      C    D  RG  CV  + +++++    Q +  +    QSP+
Sbjct: 839 NNPQSCAHSPPQWKQNKYYC----DHQRGQKCVEFSSVDNIVQHSPQLSSPIISPAQSPA 894

Query: 253 PAKPAT 258
           PA+ +T
Sbjct: 895 PAQLST 900


>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
          Length = 2230

 Score = 35.8 bits (81), Expect = 0.14
 Identities = 28/115 (24%), Positives = 54/115 (46%), Gaps = 7/115 (6%)

Query: 381  ELETPCLTLSPSPFPVSSLEEEETAVRDENCALPSRLHPQVAHKIQELVSQGIEQVYAVR 440
            ELET    L      V S EEE  A+ D       RL  + A K+ EL  +  +++ A++
Sbjct: 1600 ELETKKKELEHVNLSVKSKEEELKALED-------RLESESAAKLAELKRKAEQKIAAIK 1652

Query: 441  KQLRKFVERELFKPDEVPERHNLSFFPTVNDIKNHIHEVQKSLRNGDTVYNSEII 495
            KQL   +E +  +  +  E H       + + +  +H +++ L++ ++  +  +I
Sbjct: 1653 KQLLSQMEEKEEQYKKGTESHLSELNTKLQEREREVHILEEKLKSVESSQSETLI 1707


>gi|148596992 heart alpha-kinase [Homo sapiens]
          Length = 2170

 Score = 35.0 bits (79), Expect = 0.25
 Identities = 25/108 (23%), Positives = 53/108 (49%), Gaps = 7/108 (6%)

Query: 624  QNNSTASTMGNLPEPDQNLVAMDELVEVGDVEDTGNLEGTVHRILLGDVQTIPIQI---- 679
            +  S  +  G  P     +   +E+    +   +G+L   V + +L  V  + +++    
Sbjct: 1687 REKSLEARAGKSPGTLTAVTGSEEVKRKPEAPGSGHLAEGVKKKILSRVAALRLKLEEKE 1746

Query: 680  -IDNHSALIEENP--ESTISVSQVKQEPKEPALSMEAKKTVDYKKLSA 724
             I  +SA +++ P  E+++S ++ KQ+PK+P+   E +  V  KK+ A
Sbjct: 1747 NIRKNSAFLKKMPKLETSLSHTEEKQDPKKPSCKREGRAPVLLKKIQA 1794


>gi|38569491 serine/threonine-protein kinase QSK [Homo sapiens]
          Length = 1263

 Score = 34.7 bits (78), Expect = 0.32
 Identities = 64/303 (21%), Positives = 125/303 (41%), Gaps = 43/303 (14%)

Query: 369 VQLPTQQAHQYHELETPCLTLSPSPFPVSSLEEEETAVRDENCALPSRLHPQVAHKIQEL 428
           +QL  QQ  +     +P +T++P+   V+ ++EE +    +  A+ S       +K    
Sbjct: 499 IQLHAQQLLKRPRGPSPLVTMTPAVPAVTPVDEESSDGEPDQEAVQSS-----TYKDSNT 553

Query: 429 VSQGIEQVYAVRKQLRKFVERELFKPDEVPERHNLSFFPTVNDIKNHIHEVQKSLRNGDT 488
           +    E+   VR+        + FK       +N S    +  ++    ++QK       
Sbjct: 554 LHLPTERFSPVRRFSDGAASIQAFKAHLEKMGNNSS----IKQLQQECEQLQK------- 602

Query: 489 VYNSEIIPATLQWTTDSGNILKETMTVTFAEGNSPGESITTKVETNQTRGSL-SPEPTHL 547
           +Y  +I   TL+ T     + ++                  ++   Q + S+  P+P+  
Sbjct: 603 MYGGQIDERTLEKTQQQHMLYQQEQ--------------HHQILQQQIQDSICPPQPSPP 648

Query: 548 LSSLSSFQPKIFT-QLQGLQLQPRYTSPDESPAVVSVNNQPSSSP----SGLLDTIGSAV 602
           L +    QP + T QLQ L++QP  +SP  +     +  QPS+SP    S ++   G+A 
Sbjct: 649 LQAACENQPALLTHQLQRLRIQP--SSPPPNHPNNHLFRQPSNSPPPMSSAMIQPHGAAS 706

Query: 603 MNNNSLLLGQSHSLQR--DTCLTQNNSTASTMGNLPEPDQNLVAMDELVEVGDVEDTGNL 660
            +    L  +S   Q+  + C +  N   + +G + +P Q+     ++ E   V+   N+
Sbjct: 707 SSQFQGLPSRSAIFQQQPENCSSPPNVALTCLG-MQQPAQSQQVTIQVQE--PVDMLSNM 763

Query: 661 EGT 663
            GT
Sbjct: 764 PGT 766


>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
          Length = 5765

 Score = 34.3 bits (77), Expect = 0.42
 Identities = 37/159 (23%), Positives = 65/159 (40%), Gaps = 14/159 (8%)

Query: 488  TVYNSEIIPATLQWTTDSGNILKETMTVTFAEGN------SPGESITTKVETNQTRGSLS 541
            T   S   P++   T  +  +L  T T T A G+      +PG + TTKV T  T G  +
Sbjct: 4547 TATMSTATPSSTPETVHTSTVLTATATTTGATGSVATPSSTPGTAHTTKVPTTTTTGFTA 4606

Query: 542  PEPTHLLSSLSSFQPKIFTQLQGLQLQPRYTSPDESPAVVSVNNQPSSSPSGLLDTIGSA 601
               T   S  ++  P ++         P  T+P  S + V+ ++ P ++ +  + T  + 
Sbjct: 4607 ---TPSSSPGTALTPPVWI---STTTTPTTTTPTTSGSTVTPSSIPGTTHTARVLTTTTT 4660

Query: 602  VMNNNSLLLGQSHSLQRDT--CLTQNNSTASTMGNLPEP 638
             +   S+    S +    T   LT   +T +  G+   P
Sbjct: 4661 TVATGSMATPSSSTQTSGTPPSLTTTATTITATGSTTNP 4699



 Score = 30.0 bits (66), Expect = 7.9
 Identities = 35/159 (22%), Positives = 63/159 (39%), Gaps = 19/159 (11%)

Query: 488  TVYNSEIIPATLQWTTDSGNILKETMTVTFAEGN------SPGESITTKVETNQTRGSLS 541
            T   S   P++   T  +  +L  T T T A G+      +PG + TTKV T  T G  +
Sbjct: 2005 TATMSTATPSSTPETAHTSTVLTATATTTGATGSVATPSSTPGTAHTTKVPTTTTTGFTA 2064

Query: 542  PEPTHLLSSLSSFQPKIFTQLQGLQLQPRYTSPDESPAVVSVNNQPSSSPSGLLDTIGSA 601
               T   S  ++  P ++            T+P    + V+ ++ P ++ +  + T  + 
Sbjct: 2065 ---TPSSSPGTALTPPVWISTT--------TTPTTRGSTVTPSSIPGTTHTATVLTTTTT 2113

Query: 602  VMNNNSLLLGQSHSLQRDT--CLTQNNSTASTMGNLPEP 638
             +   S+    S +    T   LT   +T +  G+   P
Sbjct: 2114 TVATGSMATPSSSTQTSGTPPSLTTTATTITATGSTTNP 2152



 Score = 30.0 bits (66), Expect = 7.9
 Identities = 35/159 (22%), Positives = 63/159 (39%), Gaps = 19/159 (11%)

Query: 488  TVYNSEIIPATLQWTTDSGNILKETMTVTFAEGN------SPGESITTKVETNQTRGSLS 541
            T   S   P++   T  +  +L  T T T A G+      +PG + TTKV T  T G  +
Sbjct: 3262 TATMSTATPSSTPETVHTSTVLTTTTTTTRATGSVATPSSTPGTAHTTKVPTTTTTGFTA 3321

Query: 542  PEPTHLLSSLSSFQPKIFTQLQGLQLQPRYTSPDESPAVVSVNNQPSSSPSGLLDTIGSA 601
               T   S  ++  P ++            T+P    + V+ ++ P ++ +  + T  + 
Sbjct: 3322 ---TPSSSPGTALTPPVWISTT--------TTPTTRGSTVTPSSIPGTTHTATVLTTTTT 3370

Query: 602  VMNNNSLLLGQSHSLQRDT--CLTQNNSTASTMGNLPEP 638
             +   S+    S +    T   LT   +T +  G+   P
Sbjct: 3371 TVATGSMATPSSSTQTSGTPPSLTTTATTITATGSTTNP 3409


>gi|45505139 phosphoinositide-3-kinase adaptor protein 1 [Homo
           sapiens]
          Length = 805

 Score = 33.9 bits (76), Expect = 0.55
 Identities = 27/112 (24%), Positives = 46/112 (41%), Gaps = 20/112 (17%)

Query: 394 FPVSSLEEEETAVRDENCALPSRLHPQVAHKIQELVS-----QGIEQVYAVRKQLRKFVE 448
           F ++ LEEE+      +  LP+ LH    + ++ L +      G  Q Y+V  +   +  
Sbjct: 317 FGINQLEEEDMMTNQRDEELPTLLHFAAKYGLKNLTALLLTCPGALQAYSVANKHGHY-- 374

Query: 449 RELFKPDEVPERHNL--------SFFPTVNDIKNHIHEVQKSLRNGDTVYNS 492
                P+ + E+H           +  TV+ +K+HI E        D VY S
Sbjct: 375 -----PNTIAEKHGFRDLRQFIDEYVETVDMLKSHIKEELMHGEEADAVYES 421


>gi|105990535 coagulation factor V precursor [Homo sapiens]
          Length = 2224

 Score = 33.5 bits (75), Expect = 0.71
 Identities = 50/231 (21%), Positives = 87/231 (37%), Gaps = 31/231 (13%)

Query: 368  YVQLPTQQAHQYHELETPCLTLSPSPFPVSSLEEEETAVRDENCALP---SRLHPQVAHK 424
            Y   P Q   Q H    P    S SP     LE + +     + + P   S++ P   H+
Sbjct: 1127 YQTFPIQDPDQMHSTSDPSHR-SSSPELSEMLEYDRS-----HKSFPTDISQMSPSSEHE 1180

Query: 425  I-QELVSQGIEQVYAVRKQLRKFVERELFKPDEVPERHNLSFFPTVNDIKNHIHEVQKSL 483
            + Q ++S  + QV          +  EL + +  P+  + +  P +              
Sbjct: 1181 VWQTVISPDLSQVT---------LSPELSQTNLSPDLSHTTLSPELIQ------------ 1219

Query: 484  RNGDTVYNSEIIPATLQWTTDSGNILKETMTVTFAEGNSPGESITTKVETNQTRGSLSPE 543
            RN         I   L  TT S ++   T+++  ++ N   E   T +     +  LSP+
Sbjct: 1220 RNLSPALGQMPISPDLSHTTLSPDLSHTTLSLDLSQTNLSPELSQTNLSPALGQMPLSPD 1279

Query: 544  PTHLLSSLSSFQPKIFTQLQGLQLQPRYTSPDESPAVVSVNNQPSSSPSGL 594
             +H   SL   Q  +  +L  + L P  +  + SPA+  +   P  S + L
Sbjct: 1280 LSHTTLSLDFSQTNLSPELSHMTLSPELSQTNLSPALGQMPISPDLSHTTL 1330


>gi|31541941 heat shock 70kDa protein 4-like [Homo sapiens]
          Length = 839

 Score = 33.1 bits (74), Expect = 0.93
 Identities = 34/147 (23%), Positives = 60/147 (40%), Gaps = 22/147 (14%)

Query: 316 PARIYIKKVQKFPEYRVPTDPKIDKKIIRMEQEKAFNMLKKNLVDAGGVLRWYVQLPTQQ 375
           P ++Y+ K+Q+  +Y  P   K    +   E+ KA N L K            +QL  + 
Sbjct: 670 PKQVYVDKLQELKKYGQPIQMKY---MEHEERPKALNDLGKK-----------IQLVMKV 715

Query: 376 AHQYHELETPCLTLSPSPFPVSSLEEEETAVRDENCALPSRLHPQVAHKIQELVSQGIEQ 435
              Y   +     L P     + +E+ E  + D    L S+++ Q    + +     + +
Sbjct: 716 IEAYRNKDERYDHLDP-----TEMEKVEKCISDAMSWLNSKMNAQNKLSLTQDPVVKVSE 770

Query: 436 VYAVRKQLRKFVERELFKPD---EVPE 459
           + A  K+L  F    ++KP    EVPE
Sbjct: 771 IVAKSKELDNFCNPIIYKPKPKAEVPE 797


>gi|93004081 polo-like kinase 2 [Homo sapiens]
          Length = 685

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 4/85 (4%)

Query: 387 LTLSPSPFPVSSLEEEETAVRDENCALPSRLHPQVAHKIQELVSQGIEQVYAVRKQLRKF 446
           + L   PF  ++L+E    +R+    +PS L     H I  ++S+  E     R  L   
Sbjct: 273 MLLGRPPFETTNLKETYRCIREARYTMPSSLLAPAKHLIASMLSKNPED----RPSLDDI 328

Query: 447 VERELFKPDEVPERHNLSFFPTVND 471
           +  + F     P+R + S   TV D
Sbjct: 329 IRHDFFLQGFTPDRLSSSCCHTVPD 353


>gi|225543461 tetratricopeptide repeat, ankyrin repeat and coiled-coil
            containing 1 isoform 1 [Homo sapiens]
          Length = 1861

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 53/208 (25%), Positives = 78/208 (37%), Gaps = 23/208 (11%)

Query: 420  QVAHKIQELVSQGIEQVYA---VRKQLRKFVERELFKPDEVPERHNLSFFPTVNDIKNHI 476
            + A K  EL  +  E  YA    ++  R+FV       + V         PT  ++K  +
Sbjct: 1357 EFASKALELKPKSYEAFYARARAKRNSRQFVAALADLQEAV------KLCPTNQEVKRLL 1410

Query: 477  HEVQ---KSLRNGDTVYNSEIIPATLQWTTDSGNILKETMTVTFAEGNSPGESITTKVET 533
              V+   K L+          +PA L    DS N   E  T T    +      T + ET
Sbjct: 1411 ARVEEECKQLQRSQQQKQQGPLPAPLN---DSEN---EEDTPTPGLSDHFHSEETEEEET 1464

Query: 534  NQTRGSLSPEPTHLLSSLSSFQPKIFTQ--LQGLQLQPRYTSPDESPAVVSVNNQPSSSP 591
            +    S+SP P    S  SS  P  + +   +GLQ + R  SP     +     +P + P
Sbjct: 1465 SPQEESVSPTPR---SQPSSSVPSSYIRNLQEGLQSKGRPVSPQSRAGIGKSLREPVAQP 1521

Query: 592  SGLLDTIGSAVMNNNSLLLGQSHSLQRD 619
              LL     A +   S  LG   S  R+
Sbjct: 1522 GLLLQPSKQAQIVKTSQHLGSGQSAVRN 1549


>gi|7019405 host cell factor C2 [Homo sapiens]
          Length = 792

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 38/191 (19%), Positives = 77/191 (40%), Gaps = 10/191 (5%)

Query: 462 NLSFFPTV-NDIKNHIHEVQKSLRNGDTVYNSEIIPATLQWTTDSGNILKET-MTVTFAE 519
           N   +P++ ++  NH   V   LR  +  + S  +   L    D   ++ ET ++ T + 
Sbjct: 461 NAILYPSLASNASNHNSHVVDMLRKNEGPHTSANV-GVLSSCLDVRTVIPETSVSSTVSS 519

Query: 520 GNSPGESITTKVETNQTRGSLSPEPTHLLSSLSSFQPKIFTQLQGLQLQPRYTSPDESPA 579
             +     T K E++ T G++  + T L +  +  +      L   ++    T    +P 
Sbjct: 520 TQTMVTQQTIKTESSSTNGAVVKDETSLTTFSTKSEVDETYALPATKISRVETHATATPF 579

Query: 580 VVSVNNQPSSS-PSGLLDTIGSAVMNNNSLLLGQSHSLQRDTCLTQNNSTASTMGNLPEP 638
                + P ++  +G        +  NN+ L+ Q + L +         + S +GN   P
Sbjct: 580 SKETPSNPVATVKAGERQWCDVGIFKNNTALVSQFYLLPK------GKQSISKVGNADVP 633

Query: 639 DQNLVAMDELV 649
           D +L+   +LV
Sbjct: 634 DYSLLKKQDLV 644


>gi|5292161 proteasome 26S non-ATPase subunit 4 [Homo sapiens]
          Length = 377

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 3/73 (4%)

Query: 485 NGDTVYNSEIIPATLQWTTDSGNILKETMTVTFAEGNSPGESITTKVETNQTRGSLSPEP 544
           N + + N + +P  LQ   D+ NI+  + T +  E N     + T     +   +L+P+ 
Sbjct: 12  NSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENN---VGLITLANDCEVLTTLTPDT 68

Query: 545 THLLSSLSSFQPK 557
             +LS L + QPK
Sbjct: 69  GRILSKLHTVQPK 81


>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
          Length = 2285

 Score = 31.6 bits (70), Expect = 2.7
 Identities = 53/274 (19%), Positives = 98/274 (35%), Gaps = 41/274 (14%)

Query: 368 YVQLPTQQAHQYHELETPCLTLSPSPFPVSSLEEEETAVRDENCALPSRLHPQVAHKIQE 427
           Y Q P+Q  HQ           SP+P+P      ++        + P    P    + Q+
Sbjct: 518 YSQQPSQPPHQQ----------SPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQ 567

Query: 428 LVSQGIEQVYAVRKQLRKFVERELFKPDEVPERHNLS---------FFPTVNDIKNHIHE 478
                + Q  A  +   +  ++  +     P    LS           P++   K    +
Sbjct: 568 PAPSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQED 627

Query: 479 VQKSLRNG-----DTVYNSEIIPATLQWTTDSGNILKETMTVTFAEGNSPGESITTKVET 533
           +  SL++      D   + + +P   +     G +    ++ +  E ++P +S  +   +
Sbjct: 628 MNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPG-VSTSGISSSQGEQSNPAQSPFSPHTS 686

Query: 534 NQTRGSLSPEPTHLLSSLSSFQPKIFTQLQGLQLQPRYTSPDESPAVVSVNNQPSSSPSG 593
               G   P P+ + S  S  Q +               S   SPA V  N  P   PSG
Sbjct: 687 PHLPGIRGPSPSPVGSPASVAQSR---------------SGPLSPAAVPGNQMPPRPPSG 731

Query: 594 LLDTIGSAVMNNNSLLLGQSHSLQRDTCLTQNNS 627
             D+I    MN +S+   + + +QR+  + Q +S
Sbjct: 732 QSDSIMHPSMNQSSIAQDRGY-MQRNPQMPQYSS 764


>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
          Length = 2068

 Score = 31.6 bits (70), Expect = 2.7
 Identities = 53/274 (19%), Positives = 98/274 (35%), Gaps = 41/274 (14%)

Query: 368 YVQLPTQQAHQYHELETPCLTLSPSPFPVSSLEEEETAVRDENCALPSRLHPQVAHKIQE 427
           Y Q P+Q  HQ           SP+P+P      ++        + P    P    + Q+
Sbjct: 518 YSQQPSQPPHQQ----------SPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQ 567

Query: 428 LVSQGIEQVYAVRKQLRKFVERELFKPDEVPERHNLS---------FFPTVNDIKNHIHE 478
                + Q  A  +   +  ++  +     P    LS           P++   K    +
Sbjct: 568 PAPSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQED 627

Query: 479 VQKSLRNG-----DTVYNSEIIPATLQWTTDSGNILKETMTVTFAEGNSPGESITTKVET 533
           +  SL++      D   + + +P   +     G +    ++ +  E ++P +S  +   +
Sbjct: 628 MNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPG-VSTSGISSSQGEQSNPAQSPFSPHTS 686

Query: 534 NQTRGSLSPEPTHLLSSLSSFQPKIFTQLQGLQLQPRYTSPDESPAVVSVNNQPSSSPSG 593
               G   P P+ + S  S  Q +               S   SPA V  N  P   PSG
Sbjct: 687 PHLPGIRGPSPSPVGSPASVAQSR---------------SGPLSPAAVPGNQMPPRPPSG 731

Query: 594 LLDTIGSAVMNNNSLLLGQSHSLQRDTCLTQNNS 627
             D+I    MN +S+   + + +QR+  + Q +S
Sbjct: 732 QSDSIMHPSMNQSSIAQDRGY-MQRNPQMPQYSS 764


>gi|71274144 AT hook, DNA binding motif, containing 1 [Homo sapiens]
          Length = 1603

 Score = 31.6 bits (70), Expect = 2.7
 Identities = 34/133 (25%), Positives = 54/133 (40%), Gaps = 22/133 (16%)

Query: 119 PPTQTGMAQVIIPQGQLVD------VNSPRDVPEEKP-----SNRNLPTVRVDTLADNTS 167
           PP+     Q++ PQ + +D      +    ++P  +P         L    +DTL D+  
Sbjct: 266 PPSPEPEPQLLDPQPRFLDPQALEPLGEALELPPLQPLADPLGLPGLALQALDTLPDSLE 325

Query: 168 NYILHPQTSFPLPKKSVTGMLEEP--LLGPLQPLSSNTPIWACRLRSCEKIG----DSYR 221
           + +L PQ   PLPK     +L+ P   L P QPL         RL  C   G    + + 
Sbjct: 326 SQLLDPQALDPLPK-----LLDVPGRRLEPQQPLGHCPLAEPLRLDLCSPHGPPGPEGHP 380

Query: 222 GYCVSETELESVL 234
            Y +  T+   +L
Sbjct: 381 KYALRRTDRPKIL 393


>gi|50843837 hypothetical protein LOC55701 [Homo sapiens]
          Length = 1519

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 36/145 (24%), Positives = 59/145 (40%), Gaps = 17/145 (11%)

Query: 42  DSPTVLPITTREANNSLISQNIPGPLTQTQTLSAEQFHLVDQN------GQAIQYELQSL 95
           DS  + P    +A++     N+P P          + HLV +        ++   EL++ 
Sbjct: 396 DSAPLSPGDKEDASHQEALGNLPSPSEH----KLPECHLVKEEYEGSGKPESEPKELKTA 451

Query: 96  GESNAQMMIVASPTENGQVLRVIP-PTQTGMAQVIIPQGQLVDVNSPRDVPEEKPSNRNL 154
           GE   Q+     PTE G   R +  P    MA    P+G L D  +P     ++    N+
Sbjct: 452 GEKEPQLSEACGPTEEGAGERELEGPGLLCMAGHTGPEGPLSDTPTPPLETVQEGKGDNI 511

Query: 155 PTVRVDTLADNTSNYILHPQTSFPL 179
           P    + LA + S+   HP  ++ L
Sbjct: 512 PE---EALAVSVSD---HPDVAWDL 530


>gi|112363100 SLIT-ROBO Rho GTPase activating protein 2 isoform a
           [Homo sapiens]
          Length = 1071

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 28/120 (23%), Positives = 52/120 (43%), Gaps = 10/120 (8%)

Query: 402 EETAVRDENCALPSRLHPQVAHKIQELVSQGIEQVYAVRKQLRKFVERELFKPDEVPERH 461
           E+    D+ C     L  Q+   +Q+   +  E      + L K  ER L K     ++ 
Sbjct: 30  EQMKCLDQQC----ELRVQLLQDLQDFFRKKAEIEMDYSRNLEKLAERFLAKTRSTKDQQ 85

Query: 462 ---NLSFFPTVNDIKNHIHEVQKSLRNGDT---VYNSEIIPATLQWTTDSGNILKETMTV 515
              + +    VN     +++V++  R+  T   +Y + IIP  +Q + DSG + K++  V
Sbjct: 86  FKKDQNVLSPVNCWNLLLNQVKRESRDHTTLSDIYLNNIIPRFVQVSEDSGRLFKKSKEV 145


>gi|112363096 SLIT-ROBO Rho GTPase activating protein 2 isoform b
           [Homo sapiens]
          Length = 836

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 28/120 (23%), Positives = 52/120 (43%), Gaps = 10/120 (8%)

Query: 402 EETAVRDENCALPSRLHPQVAHKIQELVSQGIEQVYAVRKQLRKFVERELFKPDEVPERH 461
           E+    D+ C     L  Q+   +Q+   +  E      + L K  ER L K     ++ 
Sbjct: 30  EQMKCLDQQC----ELRVQLLQDLQDFFRKKAEIEMDYSRNLEKLAERFLAKTRSTKDQQ 85

Query: 462 ---NLSFFPTVNDIKNHIHEVQKSLRNGDT---VYNSEIIPATLQWTTDSGNILKETMTV 515
              + +    VN     +++V++  R+  T   +Y + IIP  +Q + DSG + K++  V
Sbjct: 86  FKKDQNVLSPVNCWNLLLNQVKRESRDHTTLSDIYLNNIIPRFVQVSEDSGRLFKKSKEV 145


>gi|91982772 mucin 17 [Homo sapiens]
          Length = 4493

 Score = 30.8 bits (68), Expect = 4.6
 Identities = 45/202 (22%), Positives = 82/202 (40%), Gaps = 11/202 (5%)

Query: 502  TTDSGNILKETMTVTFAEGNSPGESITTKVETNQTRGSLSPEPTHLLSSLSS---FQPKI 558
            TT   +    T++ T  + NSP  + +T++ ++ T    +  PT   S  S+     P  
Sbjct: 2524 TTPVASPEASTLSTTPVDSNSPVVT-STEISSSATSAEGTSMPTSTYSEGSTPLRSMPVS 2582

Query: 559  FTQLQGLQLQPRYTSPDESPAVVSVNNQPSSSPSGLLDTIGSAVMNNNSLLLGQSHSLQR 618
               L   +     T+P ++   V+ + + SSSP+   DT  S  ++  S +     S+  
Sbjct: 2583 TKPLASSEASTLSTTPVDTSIPVTTSTETSSSPTTAKDT--SMPISTPSEVSTSLTSILV 2640

Query: 619  DTCLTQNNSTASTMGNLPEPDQNLVAMDELVEVGDVEDTGNLEGTVHRILLGDVQTIPIQ 678
             T +   +S AST+   P   + LV        G        EG+         ++ P+ 
Sbjct: 2641 ST-MPVASSEASTLSTTPVDTRTLVT----TSTGTSSSPTTAEGSSMPTSTPGERSTPLT 2695

Query: 679  IIDNHSALIEENPESTISVSQV 700
             I   + L+  +  ST+S + V
Sbjct: 2696 NILVSTTLLANSEASTLSTTPV 2717


>gi|38093637 Nance-Horan syndrome protein isoform 1 [Homo sapiens]
          Length = 1630

 Score = 30.4 bits (67), Expect = 6.0
 Identities = 14/51 (27%), Positives = 25/51 (49%)

Query: 112  GQVLRVIPPTQTGMAQVIIPQGQLVDVNSPRDVPEEKPSNRNLPTVRVDTL 162
            G+ LR  PP    +   I+    L  +N   +V +++ +N +LP +   TL
Sbjct: 1099 GETLRSNPPPSLAITPTILKSVNLRSINKSEEVKQKEENNTDLPYLEESTL 1149


>gi|209862849 Nance-Horan syndrome protein isoform 2 [Homo sapiens]
          Length = 1474

 Score = 30.4 bits (67), Expect = 6.0
 Identities = 14/51 (27%), Positives = 25/51 (49%)

Query: 112 GQVLRVIPPTQTGMAQVIIPQGQLVDVNSPRDVPEEKPSNRNLPTVRVDTL 162
           G+ LR  PP    +   I+    L  +N   +V +++ +N +LP +   TL
Sbjct: 943 GETLRSNPPPSLAITPTILKSVNLRSINKSEEVKQKEENNTDLPYLEESTL 993


>gi|31657094 anillin, actin binding protein [Homo sapiens]
          Length = 1124

 Score = 30.4 bits (67), Expect = 6.0
 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 195 PLQPLSSNTPIWACRLRSCEKIGDSYRGYCVSETELESVLTFHKQQTQSVWGTRQSPSPA 254
           PL   S+  P+     +SC K   S +  C   TE+E     +KQ  +S      SPSP 
Sbjct: 43  PLSEASNQQPLSGGEEKSCTKPSPSKKR-CSDNTEVEVSNLENKQPVESTSAKSCSPSPV 101

Query: 255 KP 256
            P
Sbjct: 102 SP 103


>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo
           sapiens]
          Length = 1341

 Score = 30.0 bits (66), Expect = 7.9
 Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 19/96 (19%)

Query: 119 PPTQTGMAQVIIPQ------GQLVDVNSPRDVPEEKPSNRN-----LPTVRVDTLADNTS 167
           P T     ++++ Q      G L  ++SP D   E P+ +      LP V+  TLAD ++
Sbjct: 455 PNTDADTRELLVSQHTVQLVGGLSPLSSPSDTKAESPAEKVPEESVLPLVQKSTLADYSA 514

Query: 168 NYILHPQ---TSFPLPKK-----SVTGMLEEPLLGP 195
              L P+   ++ PLP K        G+ EE L  P
Sbjct: 515 QKDLEPESDRSAQPLPLKIEELALAKGITEECLKQP 550


>gi|239749217 PREDICTED: similar to Mucin-12, partial [Homo sapiens]
          Length = 861

 Score = 30.0 bits (66), Expect = 7.9
 Identities = 47/168 (27%), Positives = 66/168 (39%), Gaps = 28/168 (16%)

Query: 492 SEIIPATLQWTTDSGNILKETM---TVTFAEGNSPGESITTKVETNQTRGSLSPEPTHLL 548
           S  IP +   T   G     ++   + TF   +SPG + TT++  N T   L    T + 
Sbjct: 195 SHSIPGSTDTTLSPGTTTPSSLGPESTTFH--SSPGYTKTTRLPDNTTTSGLLEASTPVH 252

Query: 549 SSLSS----FQPKIFTQLQG--LQLQPRYTSPDESP-------AVVSVNNQPSSSPSGLL 595
           SS  S      P   T  +G     Q   +S D SP       A V ++    SSPS   
Sbjct: 253 SSTGSPHTTLSPSSSTTHEGEPTTFQSWPSSKDTSPAPSGTTSAFVKLSTTYHSSPSSTP 312

Query: 596 DTIGSAVMNNNSLLLGQS------HSLQRDTCLTQNNSTASTMGNLPE 637
            T  SA    +S  LG S      HS    T  T   + ++T G++ E
Sbjct: 313 TTHFSA----SSTTLGHSEESTPVHSSPVATATTPPPARSATSGHVEE 356


>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
          Length = 5478

 Score = 30.0 bits (66), Expect = 7.9
 Identities = 47/168 (27%), Positives = 66/168 (39%), Gaps = 28/168 (16%)

Query: 492 SEIIPATLQWTTDSGNILKETM---TVTFAEGNSPGESITTKVETNQTRGSLSPEPTHLL 548
           S  IP +   T   G     ++   + TF   +SPG + TT++  N T   L    T + 
Sbjct: 339 SHSIPGSTDTTLSPGTTTPSSLGPESTTFH--SSPGYTKTTRLPDNTTTSGLLEASTPVH 396

Query: 549 SSLSS----FQPKIFTQLQG--LQLQPRYTSPDESP-------AVVSVNNQPSSSPSGLL 595
           SS  S      P   T  +G     Q   +S D SP       A V ++    SSPS   
Sbjct: 397 SSTGSPHTTLSPSSSTTHEGEPTTFQSWPSSKDTSPAPSGTTSAFVKLSTTYHSSPSSTP 456

Query: 596 DTIGSAVMNNNSLLLGQS------HSLQRDTCLTQNNSTASTMGNLPE 637
            T  SA    +S  LG S      HS    T  T   + ++T G++ E
Sbjct: 457 TTHFSA----SSTTLGHSEESTPVHSSPVATATTPPPARSATSGHVEE 500



 Score = 30.0 bits (66), Expect = 7.9
 Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 15/143 (10%)

Query: 491  NSEIIPATLQWTTDSGNILKETMTVTFAEGNSPGESITTKVETNQTRGSLSPEPTHLLSS 550
            +S + PA+   TT  G  L E  T  ++  +SPG + TT    + T      EPT   S 
Sbjct: 2840 HSTVSPAS---TTTPG--LSEESTTVYS--SSPGSTETTVFPRSTTTSVRGEEPTTFHSR 2892

Query: 551  LSSFQPKIFTQLQGLQLQPRYTSPDESPAVVSVNNQPSSSPSGLLDTIGSAVMNNNSLLL 610
             +S    +FT+          T+   +    +    P+S+ +GL  T+ +A +   S   
Sbjct: 2893 PASTHTTLFTE--------DSTTSGLTEESTAFPGSPASTQTGLPATLTTADLGEESTTF 2944

Query: 611  GQSHSLQRDTCLTQNNSTASTMG 633
              S      T     ++T+  +G
Sbjct: 2945 PSSSGSTGTTLSPARSTTSGLVG 2967


>gi|219802034 nuclear factor related to kappaB binding protein isoform
            1 [Homo sapiens]
          Length = 1299

 Score = 30.0 bits (66), Expect = 7.9
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 5/53 (9%)

Query: 49   ITTREANNSLISQNIPGPLTQTQTLSAEQFHLVDQNGQAIQYELQSLGESNAQ 101
            +TT  A   LI+ N P        L+A+Q   + Q GQA Q  +Q++  S+ Q
Sbjct: 1223 LTTMPAGTKLIAGNKP-----VSFLTAQQLQQLQQQGQATQVRIQTVPASHLQ 1270


>gi|23346420 nuclear factor related to kappaB binding protein isoform
            2 [Homo sapiens]
          Length = 1324

 Score = 30.0 bits (66), Expect = 7.9
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 5/53 (9%)

Query: 49   ITTREANNSLISQNIPGPLTQTQTLSAEQFHLVDQNGQAIQYELQSLGESNAQ 101
            +TT  A   LI+ N P        L+A+Q   + Q GQA Q  +Q++  S+ Q
Sbjct: 1248 LTTMPAGTKLIAGNKP-----VSFLTAQQLQQLQQQGQATQVRIQTVPASHLQ 1295


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.312    0.128    0.366 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,323,582
Number of Sequences: 37866
Number of extensions: 1441892
Number of successful extensions: 3618
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 3571
Number of HSP's gapped (non-prelim): 84
length of query: 725
length of database: 18,247,518
effective HSP length: 110
effective length of query: 615
effective length of database: 14,082,258
effective search space: 8660588670
effective search space used: 8660588670
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 66 (30.0 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press