Guide to the Human Genome
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Name: TANC1 Sequence: fasta or formatted (1861aa) NCBI GI: 225543461
Description:

tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 isoform 1

Referenced in:

Ankyrin Family
Coiled-Coil Proteins
Tetratricopeptide Domains

Other entries for this name:
alt prot [1390aa] tetratricopeptide repeat, ankyrin repeat and coiled-coil containi...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4        156           4
 C cysteine            2.0         38           1
 D aspartate           3.8         71           2
 E glutamate           6.2        116           4
 F phenylalanine       2.6         48           1
 G glycine             6.8        126           2
 H histidine           3.2         60           2
 I isoleucine          3.6         67           2
 K lysine              5.6        105           2
 L leucine            10.7        199           3
 M methionine          1.7         32           1
 N asparagine          3.7         69           2
 P proline             6.0        112           3
 Q glutamine           4.9         91           3
 R arginine            5.4        100           2
 S serine             11.2        209           4
 T threonine           5.7        106           2
 V valine              5.8        108           3
 W tryptophan          0.8         14           1
 Y tyrosine            1.8         34           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tetratricopeptide repeat, ankyrin repeat and coiled... 
TANC1                 0.735   tetratricopeptide repeat, ankyrin repeat and coiled...
TANC2                 0.461   tetratricopeptide repeat, ankyrin repeat and coiled...
ANKRD50               0.079   ankyrin repeat domain 50 
ANKRD17               0.036   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.036   ankyrin repeat domain protein 17 isoform b 
ANKHD1                0.034   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.034   ANKHD1-EIF4EBP3 protein 
ANK2                  0.033   ankyrin 2 isoform 3 
ANK2                  0.033   ankyrin 2 isoform 2 
ANK2                  0.033   ankyrin 2 isoform 1 
ANK3                  0.033   ankyrin 3 isoform 1 
KIDINS220             0.032   kinase D-interacting substrate of 220 kDa 
ANKHD1                0.032   ankyrin repeat and KH domain containing 1 isoform 3 ...
ANKHD1                0.032   ankyrin repeat and KH domain containing 1 isoform 2 ...
ANK1                  0.030   ankyrin 1 isoform 9 
ANK1                  0.030   ankyrin 1 isoform 1 
ANK1                  0.030   ankyrin 1 isoform 3 
ANK1                  0.030   ankyrin 1 isoform 2 
ANK1                  0.030   ankyrin 1 isoform 4 
ANKRD28               0.029   ankyrin repeat domain 28 
DAPK1                 0.029   death-associated protein kinase 1 
LOC441869             0.028   hypothetical protein LOC441869 
ANKRD44               0.026   ankyrin repeat domain 44 
ANKRD29               0.025   ankyrin repeat domain 29 
TNKS2                 0.024   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
INVS                  0.024   inversin isoform a 
INVS                  0.024   inversin isoform b 
TNKS                  0.024   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
RIPK4                 0.024   ankyrin repeat domain 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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