Guide to the Human Genome
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Name: PIK3AP1 Sequence: fasta or formatted (805aa) NCBI GI: 45505139
Description:

phosphoinositide-3-kinase adaptor protein 1

Referenced in:

Inositol Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         48           2
 C cysteine            1.7         14           1
 D aspartate           6.0         48           3
 E glutamate           8.7         70           3
 F phenylalanine       3.5         28           2
 G glycine             4.7         38           1
 H histidine           2.6         21           1
 I isoleucine          3.4         27           1
 K lysine              4.6         37           2
 L leucine             8.9         72           3
 M methionine          2.4         19           2
 N asparagine          3.5         28           2
 P proline             7.8         63           4
 Q glutamine           4.3         35           2
 R arginine            6.3         51           2
 S serine              8.8         71           2
 T threonine           6.0         48           2
 V valine              7.3         59           3
 W tryptophan          0.7          6           1
 Y tyrosine            2.7         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphoinositide-3-kinase adaptor protein 1 
BANK1                 0.115   B-cell scaffold protein with ankyrin repeats 1 isof...
BANK1                 0.113   B-cell scaffold protein with ankyrin repeats 1 isof...
BANK1                 0.077   B-cell scaffold protein with ankyrin repeats 1 isof...
AKAP13                0.012   A-kinase anchor protein 13 isoform 1 
AKAP13                0.012   A-kinase anchor protein 13 isoform 2 
ENAH                  0.012   enabled homolog isoform a 
ENAH                  0.012   enabled homolog isoform b 
SF1                   0.012   splicing factor 1 isoform 2 
SF1                   0.012   splicing factor 1 isoform 1 
SETD1A                0.012   SET domain containing 1A 
ZC3H18                0.011   zinc finger CCCH-type containing 18 
TNRC18                0.010   trinucleotide repeat containing 18 
BRD4                  0.009   bromodomain-containing protein 4 isoform long 
RGNEF                 0.009   Rho-guanine nucleotide exchange factor 
RCOR3                 0.009   REST corepressor 3 isoform a 
RCOR3                 0.009   REST corepressor 3 isoform d 
UBA2                  0.009   SUMO-1 activating enzyme subunit 2 
DBNL                  0.009   drebrin-like isoform c 
NCOR2                 0.009   nuclear receptor co-repressor 2 isoform 1 
SCAF1                 0.009   SR-related CTD-associated factor 1 
SF3A1                 0.009   splicing factor 3a, subunit 1, 120kDa isoform 2 [Hom...
SF3A1                 0.009   splicing factor 3a, subunit 1, 120kDa isoform 1 [Homo...
SRRM1                 0.009   serine/arginine repetitive matrix 1 
PRR12                 0.009   proline rich 12 
MUC2                  0.007   mucin 2 precursor 
GREB1                 0.007   GREB1 protein isoform a 
HEPACAM               0.007   hepatocyte cell adhesion molecule 
CRKRS                 0.007   Cdc2-related kinase, arginine/serine-rich isoform 1...
NT5C1B                0.007   5' nucleotidase, cytosolic IB isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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