NFRKB 13887

Name: NFRKB	Sequence: fasta or formatted (1299aa)		NCBI GI: 219802034
Description: nuclear factor related to kappaB binding protein isoform 1		Not currently referenced in the text
Other entries for this name: alt prot {1324aa} nuclear factor related to kappaB binding protein isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.2 120 4 C cysteine 0.6 8 1 D aspartate 3.8 49 1 E glutamate 5.2 68 3 F phenylalanine 2.4 31 2 G glycine 5.6 73 2 H histidine 1.8 23 2 I isoleucine 3.5 45 2 K lysine 6.3 82 5 L leucine 9.4 122 3 M methionine 1.7 22 2 N asparagine 2.1 27 1 P proline 8.5 110 3 Q glutamine 6.5 85 3 R arginine 4.4 57 2 S serine 11.4 148 3 T threonine 8.1 105 2 V valine 7.8 101 3 W tryptophan 0.7 9 1 Y tyrosine 1.1 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nuclear factor related to kappaB binding protein is... NFRKB 0.996 nuclear factor related to kappaB binding protein iso... MUC17 0.033 mucin 17 MUC5B 0.024 mucin 5, subtype B, tracheobronchial HCFC1 0.024 host cell factor 1 NACA 0.023 nascent polypeptide-associated complex alpha subuni... MUC5AC 0.022 mucin 5AC TAF4 0.022 TBP-associated factor 4 PRG4 0.021 proteoglycan 4 isoform D PRG4 0.021 proteoglycan 4 isoform C PRG4 0.021 proteoglycan 4 isoform B PRG4 0.021 proteoglycan 4 isoform A LOC100133756 0.021 PREDICTED: hypothetical protein, partial SRCAP 0.020 Snf2-related CBP activator protein MUC2 0.020 mucin 2 precursor LOC100294420 0.018 PREDICTED: similar to mucin 2 POM121C 0.018 POM121 membrane glycoprotein (rat)-like MUC16 0.018 mucin 16 LOC100131514 0.018 PREDICTED: similar to hCG1747327, partial MUC12 0.018 PREDICTED: mucin 12 MUC6 0.018 mucin 6, gastric MUC12 0.017 PREDICTED: mucin 12, cell surface associated MUC4 0.017 mucin 4 isoform a MUC3A 0.017 PREDICTED: mucin 3A, intestinal LOC100130716 0.016 PREDICTED: similar to mucin 11 LOC100294236 0.016 PREDICTED: similar to diffuse panbronchiolitis crit... LOC729792 0.015 PREDICTED: hypothetical protein LOC100294136 0.015 PREDICTED: hypothetical protein LOC100294091 0.015 PREDICTED: hypothetical protein NUP214 0.015 nucleoporin 214kDa Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.