Guide to the Human Genome
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Name: SRGAP2 Sequence: fasta or formatted (1071aa) NCBI GI: 112363100
Description:

SLIT-ROBO Rho GTPase activating protein 2 isoform a

Referenced in:

Rho and Rac

Other entries for this name:
alt prot [836aa] SLIT-ROBO Rho GTPase activating protein 2 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         65           2
 C cysteine            2.0         21           2
 D aspartate           6.2         66           2
 E glutamate           7.9         85           2
 F phenylalanine       3.3         35           2
 G glycine             3.7         40           2
 H histidine           2.8         30           2
 I isoleucine          4.9         53           3
 K lysine              7.4         79           2
 L leucine             8.5         91           3
 M methionine          2.6         28           2
 N asparagine          4.0         43           2
 P proline             5.0         54           2
 Q glutamine           6.2         66           2
 R arginine            5.6         60           2
 S serine             10.2        109           3
 T threonine           5.3         57           2
 V valine              5.8         62           2
 W tryptophan          0.3          3           2
 Y tyrosine            2.2         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SLIT-ROBO Rho GTPase activating protein 2 isoform a... 
SRGAP2                0.780   SLIT-ROBO Rho GTPase activating protein 2 isoform b...
SRGAP1                0.663   SLIT-ROBO Rho GTPase activating protein 1 
SRGAP3                0.581   SLIT-ROBO Rho GTPase activating protein 3 isoform b ...
SRGAP3                0.573   SLIT-ROBO Rho GTPase activating protein 3 isoform a ...
ARHGAP4               0.339   Rho GTPase activating protein 4 
ARHGAP22              0.040   Rho GTPase activating protein 2 
CHN2                  0.039   beta chimerin isoform 2 
CHN2                  0.039   beta chimerin isoform 1 
ARHGAP24              0.038   Rho GTPase activating protein 24 isoform 3 
ARHGAP24              0.038   Rho GTPase activating protein 24 isoform 2 
ARHGAP24              0.038   Rho GTPase activating protein 24 isoform 1 
ARHGAP23              0.038   Rho GTPase activating protein 23 
CHN1                  0.036   chimerin (chimaerin) 1 isoform a 
CHN1                  0.036   chimerin (chimaerin) 1 isoform b 
ARHGAP27              0.034   Rho GTPase activating protein 27 isoform b 
ARHGAP27              0.034   Rho GTPase activating protein 27 isoform a 
ARHGAP21              0.034   Rho GTPase activating protein 21 
OPHN1                 0.033   oligophrenin 1 
ARHGAP25              0.032   Rho GTPase activating protein 25 isoform a 
ARHGAP25              0.032   Rho GTPase activating protein 25 isoform b 
GRLF1                 0.032   glucocorticoid receptor DNA binding factor 1 
BCR                   0.032   breakpoint cluster region isoform 2 
BCR                   0.032   breakpoint cluster region isoform 1 
ARHGAP12              0.032   Rho GTPase activating protein 12 
FCHSD2                0.030   FCH and double SH3 domains 2 
ARHGAP15              0.030   ARHGAP15 
ARHGAP11B             0.030   Rho GTPase activating protein 11B 
SH3BP1                0.030   SH3-domain binding protein 1 
ARHGAP5               0.030   Rho GTPase activating protein 5 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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