Guide to the Human Genome
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Name: ALPK2 Sequence: fasta or formatted (2170aa) NCBI GI: 148596992
Description:

heart alpha-kinase

Referenced in:

Additional Serine / Threonine Protein Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7        146           3
 C cysteine            2.4         53           2
 D aspartate           4.9        106           3
 E glutamate           9.8        213           3
 F phenylalanine       2.9         63           2
 G glycine             6.9        150           2
 H histidine           2.7         58           2
 I isoleucine          4.0         87           2
 K lysine              6.4        139           3
 L leucine             7.1        153           2
 M methionine          1.4         31           1
 N asparagine          3.9         85           3
 P proline             6.0        131           2
 Q glutamine           5.4        118           3
 R arginine            3.9         85           2
 S serine             11.4        248           6
 T threonine           6.4        138           3
 V valine              5.2        112           2
 W tryptophan          0.7         15           1
 Y tyrosine            1.8         39           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   heart alpha-kinase 
ALPK3                 0.070   alpha-kinase 3 
TRPM6                 0.012   transient receptor potential cation channel, subfami...
TRPM7                 0.010   transient receptor potential cation channel, subfam...
TTN                   0.009   titin isoform N2-A 
TTN                   0.009   titin isoform novex-2 
TTN                   0.009   titin isoform novex-1 
TTN                   0.009   titin isoform N2-B 
OBSL1                 0.009   obscurin-like 1 
TTN                   0.008   titin isoform novex-3 
MUC12                 0.007   PREDICTED: mucin 12 
MYOM1                 0.007   myomesin 1 isoform b 
MYOM1                 0.007   myomesin 1 isoform a 
MYLK                  0.007   myosin light chain kinase isoform 3A 
MYLK                  0.007   myosin light chain kinase isoform 1 
MYPN                  0.007   myopalladin 
OBSCN                 0.007   obscurin, cytoskeletal calmodulin and titin-interact...
OBSCN                 0.007   obscurin, cytoskeletal calmodulin and titin-interac...
SPEG                  0.006   SPEG complex locus 
DMP1                  0.006   dentin matrix acidic phosphoprotein 1 isoform 1 precu...
DMP1                  0.006   dentin matrix acidic phosphoprotein 1 isoform 2 pre...
EEF2K                 0.006   elongation factor-2 kinase 
MYOM3                 0.006   myomesin family, member 3 
PALLD                 0.006   palladin 
MYLK                  0.006   myosin light chain kinase isoform 3B 
MYLK                  0.006   myosin light chain kinase isoform 2 
CDCA2                 0.006   cell division cycle associated 2 
LOC729792             0.005   PREDICTED: hypothetical protein 
LOC729792             0.005   PREDICTED: hypothetical protein 
LOC729792             0.005   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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