Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: SRGAP2 Sequence: fasta or formatted (836aa) NCBI GI: 112363096
Description:

SLIT-ROBO Rho GTPase activating protein 2 isoform b

Referenced in:

Rho and Rac

Other entries for this name:
alt prot [1071aa] SLIT-ROBO Rho GTPase activating protein 2 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         49           1
 C cysteine            2.0         17           2
 D aspartate           6.6         55           2
 E glutamate           9.0         75           2
 F phenylalanine       3.6         30           2
 G glycine             3.6         30           2
 H histidine           2.9         24           2
 I isoleucine          5.4         45           3
 K lysine              7.5         63           2
 L leucine             9.1         76           3
 M methionine          2.9         24           2
 N asparagine          4.2         35           2
 P proline             3.3         28           2
 Q glutamine           6.8         57           2
 R arginine            5.4         45           2
 S serine              8.1         68           2
 T threonine           4.7         39           2
 V valine              5.9         49           2
 W tryptophan          0.4          3           2
 Y tyrosine            2.9         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SLIT-ROBO Rho GTPase activating protein 2 isoform b... 
SRGAP2                1.000   SLIT-ROBO Rho GTPase activating protein 2 isoform a...
SRGAP1                0.730   SLIT-ROBO Rho GTPase activating protein 1 
SRGAP3                0.668   SLIT-ROBO Rho GTPase activating protein 3 isoform b ...
SRGAP3                0.659   SLIT-ROBO Rho GTPase activating protein 3 isoform a ...
ARHGAP4               0.435   Rho GTPase activating protein 4 
ARHGAP22              0.051   Rho GTPase activating protein 2 
CHN2                  0.049   beta chimerin isoform 2 
CHN2                  0.049   beta chimerin isoform 1 
ARHGAP24              0.049   Rho GTPase activating protein 24 isoform 3 
ARHGAP24              0.049   Rho GTPase activating protein 24 isoform 2 
ARHGAP24              0.049   Rho GTPase activating protein 24 isoform 1 
ARHGAP23              0.049   Rho GTPase activating protein 23 
CHN1                  0.046   chimerin (chimaerin) 1 isoform a 
CHN1                  0.046   chimerin (chimaerin) 1 isoform b 
ARHGAP27              0.043   Rho GTPase activating protein 27 isoform b 
ARHGAP27              0.043   Rho GTPase activating protein 27 isoform a 
ARHGAP21              0.043   Rho GTPase activating protein 21 
OPHN1                 0.042   oligophrenin 1 
ARHGAP25              0.041   Rho GTPase activating protein 25 isoform a 
ARHGAP25              0.041   Rho GTPase activating protein 25 isoform b 
GRLF1                 0.041   glucocorticoid receptor DNA binding factor 1 
BCR                   0.041   breakpoint cluster region isoform 2 
BCR                   0.041   breakpoint cluster region isoform 1 
ARHGAP12              0.041   Rho GTPase activating protein 12 
FCHSD2                0.039   FCH and double SH3 domains 2 
ARHGAP15              0.039   ARHGAP15 
ARHGAP11B             0.038   Rho GTPase activating protein 11B 
SH3BP1                0.038   SH3-domain binding protein 1 
ARHGAP5               0.038   Rho GTPase activating protein 5 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press