Guide to the Human Genome
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Name: NHS Sequence: fasta or formatted (1630aa) NCBI GI: 38093637
Description:

Nance-Horan syndrome protein isoform 1

Referenced in:

Additional Genes in Development

Other entries for this name:
alt prot [1474aa] Nance-Horan syndrome protein isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1        132           6
 C cysteine            1.4         23           1
 D aspartate           5.8         95           2
 E glutamate           6.6        107           2
 F phenylalanine       2.3         38           2
 G glycine             4.8         79           2
 H histidine           3.2         52           4
 I isoleucine          3.7         60           2
 K lysine              5.0         81           2
 L leucine             7.2        118           4
 M methionine          1.0         16           1
 N asparagine          4.0         65           2
 P proline             9.3        151           6
 Q glutamine           4.4         71           2
 R arginine            6.3        103           3
 S serine             14.8        241           6
 T threonine           5.8         95           2
 V valine              4.4         71           1
 W tryptophan          0.6          9           1
 Y tyrosine            1.4         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Nance-Horan syndrome protein isoform 1 
NHS                   0.879   Nance-Horan syndrome protein isoform 2 
NHSL1                 0.121   NHS-like 1 
NHSL2                 0.047   NHS-like 2 
MUC12                 0.014   PREDICTED: mucin 12 
MUC12                 0.014   PREDICTED: mucin 12, cell surface associated 
DSPP                  0.012   dentin sialophosphoprotein preproprotein 
MUC16                 0.009   mucin 16 
FMNL2                 0.009   formin-like 2 
PRR12                 0.009   proline rich 12 
RSBN1                 0.008   round spermatid basic protein 1 
FMNL1                 0.008   formin-like 1 
STOX2                 0.008   storkhead box 2 
NACAD                 0.008   NAC alpha domain containing 
NACAD                 0.008   PREDICTED: NAC alpha domain containing 
UNCX                  0.008   UNC homeobox 
DIAPH1                0.007   diaphanous 1 isoform 2 
DIAPH1                0.007   diaphanous 1 isoform 1 
BAT3                  0.007   HLA-B associated transcript-3 isoform b 
BAT3                  0.007   HLA-B associated transcript-3 isoform b 
BAT3                  0.007   HLA-B associated transcript-3 isoform b 
BAT3                  0.007   HLA-B associated transcript-3 isoform a 
ENAH                  0.007   enabled homolog isoform a 
ENAH                  0.007   enabled homolog isoform b 
RANBP9                0.007   RAN binding protein 9 
HCN2                  0.007   hyperpolarization activated cyclic nucleotide-gated...
INF2                  0.007   inverted formin 2 isoform 2 
INF2                  0.007   inverted formin 2 isoform 1 
KIAA1522              0.007   hypothetical protein LOC57648 
CDKN1C                0.007   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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