Guide to the Human Genome
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Name: ANLN Sequence: fasta or formatted (1124aa) NCBI GI: 31657094
Description:

anillin, actin binding protein

Referenced in:

Myosin

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         74           2
 C cysteine            2.1         24           2
 D aspartate           5.2         58           4
 E glutamate           8.0         90           2
 F phenylalanine       2.5         28           1
 G glycine             4.1         46           2
 H histidine           1.0         11           1
 I isoleucine          4.3         48           2
 K lysine              8.2         92           4
 L leucine             8.5         96           3
 M methionine          1.6         18           1
 N asparagine          4.5         51           2
 P proline             5.8         65           2
 Q glutamine           5.2         59           2
 R arginine            5.7         64           3
 S serine             12.5        140           3
 T threonine           7.0         79           3
 V valine              5.3         60           2
 W tryptophan          0.8          9           1
 Y tyrosine            1.1         12           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   anillin, actin binding protein 
RTKN2                 0.019   rhotekin 2 
NOL8                  0.013   nucleolar protein 8 
ANKRD36               0.012   PREDICTED: ankyrin repeat domain 36 
SRRM2                 0.012   splicing coactivator subunit SRm300 
CCDC144A              0.011   coiled-coil domain containing 144A 
CYTH1                 0.011   cytohesin 1 isoform 2 
CYTH1                 0.011   cytohesin 1 isoform 1 
ANK3                  0.011   ankyrin 3 isoform 1 
CYTH2                 0.011   cytohesin 2 isoform 2 
CYTH2                 0.011   cytohesin 2 isoform 1 
EIF5B                 0.011   eukaryotic translation initiation factor 5B 
PLEKHA7               0.010   pleckstrin homology domain containing, family A mem...
LOC400986             0.010   PREDICTED: protein immuno-reactive with anti-PTH po...
TCOF1                 0.010   Treacher Collins-Franceschetti syndrome 1 isoform e...
TCOF1                 0.010   Treacher Collins-Franceschetti syndrome 1 isoform d...
TCOF1                 0.010   Treacher Collins-Franceschetti syndrome 1 isoform a ...
TCOF1                 0.010   Treacher Collins-Franceschetti syndrome 1 isoform c ...
PCLO                  0.009   piccolo isoform 2 
PCLO                  0.009   piccolo isoform 1 
CYTH3                 0.009   cytohesin 3 
NEFH                  0.009   neurofilament, heavy polypeptide 200kDa 
OPTN                  0.009   optineurin 
OPTN                  0.009   optineurin 
OPTN                  0.009   optineurin 
OPTN                  0.009   optineurin 
MUC17                 0.009   mucin 17 
TRIOBP                0.009   TRIO and F-actin binding protein isoform 6 
LOC100294236          0.008   PREDICTED: similar to diffuse panbronchiolitis crit...
DPCR1                 0.008   diffuse panbronchiolitis critical region 1 protein ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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