Guide to the Human Genome
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Name: QSK Sequence: fasta or formatted (1263aa) NCBI GI: 38569491
Description:

serine/threonine-protein kinase QSK

Referenced in:

Additional Serine / Threonine Protein Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         88           2
 C cysteine            1.7         22           1
 D aspartate           4.6         58           2
 E glutamate           5.5         69           2
 F phenylalanine       2.8         35           2
 G glycine             6.1         77           2
 H histidine           4.7         59           3
 I isoleucine          3.8         48           2
 K lysine              3.6         45           2
 L leucine            10.2        129           3
 M methionine          3.2         40           1
 N asparagine          3.7         47           2
 P proline             8.4        106           3
 Q glutamine           9.7        123          10
 R arginine            4.7         59           2
 S serine              9.1        115           3
 T threonine           4.2         53           2
 V valine              4.4         56           2
 W tryptophan          0.2          3           1
 Y tyrosine            2.5         31           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   serine/threonine-protein kinase QSK 
SIK2                  0.172   SNF1-like kinase 2 
SIK1                  0.151   SNF1-like kinase 
MARK2                 0.140   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.140   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.140   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.140   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.140   MAP/microtubule affinity-regulating kinase 2 isoform...
MARK3                 0.140   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.140   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.140   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.140   MAP/microtubule affinity-regulating kinase 3 isoform...
MARK1                 0.139   MAP/microtubule affinity-regulating kinase 1 
MARK4                 0.139   MAP/microtubule affinity-regulating kinase 4 
BRSK2                 0.106   BR serine/threonine kinase 2 
BRSK1                 0.105   BR serine/threonine kinase 1 
PRKAA2                0.097   AMP-activated protein kinase alpha 2 catalytic subun...
PRKAA1                0.094   protein kinase, AMP-activated, alpha 1 catalytic sub...
SNRK                  0.094   SNF related kinase 
SNRK                  0.094   SNF related kinase 
MGC42105              0.093   serine/threonine-protein kinase NIM1 
PRKAA1                0.090   protein kinase, AMP-activated, alpha 1 catalytic sub...
NUAK1                 0.089   AMPK-related protein kinase 5 
NUAK2                 0.085   NUAK family, SNF1-like kinase, 2 
MELK                  0.085   maternal embryonic leucine zipper kinase 
HUNK                  0.068   hormonally upregulated Neu-associated kinase 
TSSK1B                0.068   testis-specific serine kinase 1 
TSSK3                 0.064   testis-specific serine kinase 3 
TSSK2                 0.062   testis-specific serine kinase 2 
DCLK3                 0.061   doublecortin-like kinase 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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