Guide to the Human Genome
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Name: DMRT3 Sequence: fasta or formatted (472aa) NCBI GI: 11056048
Description:

doublesex and mab-3 related transcription factor 3

Referenced in:

Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         37           5
 C cysteine            2.1         10           1
 D aspartate           4.9         23           2
 E glutamate           5.5         26           2
 F phenylalanine       2.8         13           1
 G glycine             5.5         26           2
 H histidine           1.3          6           1
 I isoleucine          2.8         13           2
 K lysine              4.0         19           2
 L leucine             9.1         43           2
 M methionine          1.1          5           1
 N asparagine          3.4         16           1
 P proline            12.3         58           4
 Q glutamine           5.5         26           3
 R arginine            6.4         30           2
 S serine             12.3         58           3
 T threonine           4.7         22           1
 V valine              5.5         26           2
 W tryptophan          0.8          4           1
 Y tyrosine            2.3         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   doublesex and mab-3 related transcription factor 3 [... 
DMRTA2                0.133   DMRT-like family A2 
DMRTA1                0.120   DMRT-like family A1 
DMRT2                 0.090   doublesex and mab-3 related transcription factor 2 ...
DMRT2                 0.090   doublesex and mab-3 related transcription factor 2 is...
DMRT2                 0.090   doublesex and mab-3 related transcription factor 2 ...
DMRTC2                0.083   DMRT-like family C2 
DMRT1                 0.080   doublesex and mab-3 related transcription factor 1 [...
DMRTB1                0.071   DMRT-like family B with proline-rich C-terminal, 1 [...
TNS1                  0.026   tensin 
NCOR2                 0.024   nuclear receptor co-repressor 2 isoform 2 
CREBBP                0.021   CREB binding protein isoform b 
CREBBP                0.021   CREB binding protein isoform a 
CASKIN2               0.020   cask-interacting protein 2 isoform b 
CASKIN2               0.020   cask-interacting protein 2 isoform a 
SPEN                  0.019   spen homolog, transcriptional regulator 
EP300                 0.019   E1A binding protein p300 
NCOR2                 0.019   nuclear receptor co-repressor 2 isoform 1 
FOXG1                 0.018   forkhead box G1 
CCDC96                0.018   coiled-coil domain containing 96 
HTT                   0.018   huntingtin 
KIF18B                0.018   kinesin family member 18B 
RFX1                  0.018   regulatory factor X1 
NIPBL                 0.018   delangin isoform B 
NIPBL                 0.018   delangin isoform A 
WNK4                  0.017   WNK lysine deficient protein kinase 4 
BSN                   0.017   bassoon protein 
SF1                   0.017   splicing factor 1 isoform 3 
RAPH1                 0.017   Ras association and pleckstrin homology domains 1 is...
C1orf127              0.017   hypothetical protein LOC148345 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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