Guide to the Human Genome
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Name: DMRT2 Sequence: fasta or formatted (226aa) NCBI GI: 5729806
Description:

doublesex and mab-3 related transcription factor 2 isoform 1

Referenced in:

Additional Genes in Development

Other entries for this name:
alt prot [561aa] doublesex and mab-3 related transcription factor 2 isoform 2
alt mRNA [226aa] doublesex and mab-3 related transcription factor 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.2         23           2
 C cysteine            4.4         10           1
 D aspartate           7.1         16           3
 E glutamate           8.8         20           3
 F phenylalanine       1.3          3           1
 G glycine            10.2         23           3
 H histidine           1.3          3           1
 I isoleucine          1.3          3           1
 K lysine              4.0          9           2
 L leucine             7.1         16           2
 M methionine          1.8          4           1
 N asparagine          2.2          5           2
 P proline             9.7         22           3
 Q glutamine           5.8         13           2
 R arginine            8.4         19           2
 S serine              5.3         12           1
 T threonine           2.2          5           1
 V valine              5.8         13           2
 W tryptophan          0.9          2           1
 Y tyrosine            2.2          5           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   doublesex and mab-3 related transcription factor 2 is... 
DMRT2                 1.000   doublesex and mab-3 related transcription factor 2 ...
DMRT2                 0.922   doublesex and mab-3 related transcription factor 2 ...
DMRT1                 0.215   doublesex and mab-3 related transcription factor 1 [...
DMRTA1                0.211   DMRT-like family A1 
DMRTA2                0.204   DMRT-like family A2 
DMRT3                 0.186   doublesex and mab-3 related transcription factor 3 [...
DMRTC2                0.160   DMRT-like family C2 
DMRTB1                0.122   DMRT-like family B with proline-rich C-terminal, 1 [...
PRB2                  0.044   proline-rich protein BstNI subfamily 2 
PRG2                  0.044   plasticity-related protein 2 
KCTD1                 0.044   potassium channel tetramerisation domain containing...
PRB1                  0.042   proline-rich protein BstNI subfamily 1 isoform 1 pre...
SFPQ                  0.042   splicing factor proline/glutamine rich (polypyrimidin...
PSD                   0.040   pleckstrin and Sec7 domain containing 
ATAD2                 0.038   ATPase family, AAA domain containing 2 
LOC100287390          0.038   PREDICTED: hypothetical protein XP_002342820 
LOC100287390          0.038   PREDICTED: hypothetical protein 
KNDC1                 0.035   kinase non-catalytic C-lobe domain (KIND) containin...
OGFR                  0.035   opioid growth factor receptor 
LOC729196             0.033   PREDICTED: similar to unc-93 homolog B1 (C. elegans...
CIC                   0.033   capicua homolog 
BCL9L                 0.033   B-cell CLL/lymphoma 9-like 
C19orf57              0.033   hypothetical protein LOC79173 
ADAMTS19              0.033   ADAM metallopeptidase with thrombospondin type 1 mo...
CCDC96                0.033   coiled-coil domain containing 96 
MARCKS                0.033   myristoylated alanine-rich protein kinase C substra...
PRB1                  0.033   proline-rich protein BstNI subfamily 1 isoform 2 pre...
C7orf47               0.033   hypothetical protein LOC221908 
PHF23                 0.031   PHD finger protein 23 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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