Guide to the Human Genome
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Name: TNS1 Sequence: fasta or formatted (1735aa) NCBI GI: 66529407
Description:

tensin

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1        141           3
 C cysteine            0.9         16           1
 D aspartate           4.0         69           2
 E glutamate           5.1         89           3
 F phenylalanine       3.0         52           2
 G glycine             8.2        143           3
 H histidine           3.6         62           2
 I isoleucine          2.8         49           2
 K lysine              3.7         65           3
 L leucine             7.7        133           3
 M methionine          1.8         32           2
 N asparagine          3.2         55           2
 P proline            10.8        188           3
 Q glutamine           4.8         83           9
 R arginine            5.4         93           3
 S serine             12.9        223           3
 T threonine           5.2         91           2
 V valine              5.4         94           3
 W tryptophan          0.5          9           1
 Y tyrosine            2.8         48           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tensin 
TNS3                  0.190   tensin 3 
TENC1                 0.136   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.136   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.135   tensin like C1 domain containing phosphatase isoform...
TNS4                  0.084   tensin 4 
GAK                   0.034   cyclin G associated kinase 
PTEN                  0.033   phosphatase and tensin homolog 
TPTE                  0.028   transmembrane phosphatase with tensin homology isofo...
TPTE                  0.028   transmembrane phosphatase with tensin homology isofo...
TPTE                  0.028   transmembrane phosphatase with tensin homology isof...
DNAJC6                0.027   DnaJ (Hsp40) homolog, subfamily C, member 6 
TPTE2                 0.025   TPTE and PTEN homologous inositol lipid phosphatase...
TPTE2                 0.025   TPTE and PTEN homologous inositol lipid phosphatase...
TPTE2                 0.025   TPTE and PTEN homologous inositol lipid phosphatase...
NACA                  0.021   nascent polypeptide-associated complex alpha subuni...
FLJ22184              0.018   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.018   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.017   PREDICTED: hypothetical protein LOC80164 
CASKIN1               0.016   CASK interacting protein 1 
MLL2                  0.015   myeloid/lymphoid or mixed-lineage leukemia 2 
KIAA1522              0.014   hypothetical protein LOC57648 
MUC12                 0.014   PREDICTED: mucin 12 
ATN1                  0.013   atrophin-1 
ATN1                  0.013   atrophin-1 
MUC12                 0.013   PREDICTED: mucin 12 
BAT2D1                0.013   HBxAg transactivated protein 2 
PRG4                  0.013   proteoglycan 4 isoform D 
PRG4                  0.013   proteoglycan 4 isoform C 
PRG4                  0.013   proteoglycan 4 isoform B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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