SF1 27968

Name: SF1	Sequence: fasta or formatted (548aa)		NCBI GI: 42544123
Description: splicing factor 1 isoform 3		Referenced in: Capping and Splicing
Other entries for this name: alt prot [638aa] splicing factor 1 isoform 2 alt prot [80aa] splicing factor 1 isoform 4 alt prot [639aa] splicing factor 1 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.8 32 3 C cysteine 0.7 4 1 D aspartate 3.6 20 2 E glutamate 5.5 30 3 F phenylalanine 1.3 7 1 G glycine 9.1 50 3 H histidine 2.7 15 2 I isoleucine 3.5 19 1 K lysine 4.9 27 2 L leucine 6.4 35 2 M methionine 4.7 26 2 N asparagine 4.4 24 2 P proline 17.2 94 7 Q glutamine 5.5 30 6 R arginine 6.6 36 1 S serine 6.4 35 3 T threonine 5.7 31 2 V valine 3.3 18 1 W tryptophan 1.3 7 1 Y tyrosine 1.5 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 splicing factor 1 isoform 3 SF1 0.964 splicing factor 1 isoform 2 SF1 0.964 splicing factor 1 isoform 1 SF1 0.076 splicing factor 1 isoform 4 QKI 0.066 quaking homolog, KH domain RNA binding isoform HQK-7... QKI 0.066 quaking homolog, KH domain RNA binding isoform HQK-7... QKI 0.066 quaking homolog, KH domain RNA binding isoform HQK-6... QKI 0.066 quaking homolog, KH domain RNA binding isoform HQK-5... SF3B4 0.065 splicing factor 3b, subunit 4 CPSF6 0.058 cleavage and polyadenylation specific factor 6, 68 ... PRB3 0.057 proline-rich protein BstNI subfamily 3 precursor [H... PRB1 0.057 proline-rich protein BstNI subfamily 1 isoform 1 pre... PRB2 0.056 proline-rich protein BstNI subfamily 2 WIPF2 0.056 WIRE protein WASF2 0.056 WAS protein family, member 2 FMN2 0.054 formin 2 RERE 0.054 atrophin-1 like protein isoform b RERE 0.054 atrophin-1 like protein isoform a RERE 0.054 atrophin-1 like protein isoform a DIAPH1 0.052 diaphanous 1 isoform 2 DIAPH1 0.052 diaphanous 1 isoform 1 WIPF1 0.052 WAS/WASL interacting protein family, member 1 [Homo... WIPF1 0.052 WAS/WASL interacting protein family, member 1 SFPQ 0.051 splicing factor proline/glutamine rich (polypyrimidin... WASL 0.050 Wiskott-Aldrich syndrome gene-like protein KHDRBS3 0.050 KH domain containing, RNA binding, signal transductio... WDR33 0.049 WD repeat domain 33 isoform 1 KHDRBS2 0.049 KH domain-containing, RNA-binding, signal transduct... WAS 0.048 Wiskott-Aldrich syndrome protein PRB4 0.048 proline-rich protein BstNI subfamily 4 precursor [Ho... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.