CCDC96 15982

Name: CCDC96	Sequence: fasta or formatted (555aa)		NCBI GI: 23503317
Description: coiled-coil domain containing 96		Referenced in: Coiled-Coil Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.9 55 4 C cysteine 0.9 5 1 D aspartate 4.3 24 2 E glutamate 17.7 98 6 F phenylalanine 1.6 9 1 G glycine 6.8 38 2 H histidine 1.8 10 2 I isoleucine 2.3 13 1 K lysine 7.6 42 2 L leucine 10.6 59 3 M methionine 1.6 9 1 N asparagine 1.8 10 1 P proline 4.3 24 2 Q glutamine 7.6 42 2 R arginine 7.7 43 2 S serine 4.7 26 2 T threonine 3.6 20 1 V valine 3.4 19 2 W tryptophan 0.5 3 1 Y tyrosine 1.1 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 96 CEP164 0.063 centrosomal protein 164kDa CCDC113 0.051 coiled-coil domain containing 113 isoform 1 TCHH 0.049 trichohyalin PLEC1 0.047 plectin 1 isoform 11 PLEC1 0.047 plectin 1 isoform 10 PLEC1 0.047 plectin 1 isoform 8 PLEC1 0.047 plectin 1 isoform 7 PLEC1 0.047 plectin 1 isoform 6 PLEC1 0.047 plectin 1 isoform 3 PLEC1 0.047 plectin 1 isoform 2 PLEC1 0.047 plectin 1 isoform 1 CCDC113 0.047 coiled-coil domain containing 113 isoform 2 RP1L1 0.046 retinitis pigmentosa 1-like 1 RPGR 0.042 retinitis pigmentosa GTPase regulator isoform C [Hom... CROCC 0.042 ciliary rootlet coiled-coil HNRNPUL2 0.041 heterogeneous nuclear ribonucleoprotein U-like 2 [H... CCDC88B 0.039 coiled-coil domain containing 88 CALD1 0.038 caldesmon 1 isoform 1 MYH14 0.037 myosin, heavy chain 14 isoform 1 MYH14 0.037 myosin, heavy chain 14 isoform 2 MYH14 0.037 myosin, heavy chain 14 isoform 3 CCDC136 0.036 coiled-coil domain containing 136 PPL 0.036 periplakin CGNL1 0.035 cingulin-like 1 KIF5C 0.034 kinesin family member 5C NUMA1 0.033 nuclear mitotic apparatus protein 1 CEP250 0.032 centrosomal protein 2 RNF20 0.032 ring finger protein 20 NEFM 0.032 neurofilament, medium polypeptide 150kDa isoform 1 ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.