Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: DTX2 Sequence: fasta or formatted (622aa) NCBI GI: 156564380
Description:

deltex 2 isoform a

Referenced in:

Notch Pathway

Other entries for this name:
alt mRNA [622aa] deltex 2 isoform a
alt mRNA [622aa] deltex 2 isoform a
alt prot [575aa] deltex 2 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         48           2
 C cysteine            2.7         17           1
 D aspartate           3.1         19           2
 E glutamate           3.7         23           2
 F phenylalanine       2.1         13           1
 G glycine             8.2         51           1
 H histidine           3.7         23           2
 I isoleucine          3.1         19           2
 K lysine              3.7         23           1
 L leucine             8.0         50           2
 M methionine          2.3         14           1
 N asparagine          2.7         17           1
 P proline             9.8         61           2
 Q glutamine           5.9         37           2
 R arginine            4.7         29           2
 S serine             10.0         62           3
 T threonine           7.2         45           2
 V valine              6.4         40           2
 W tryptophan          1.6         10           1
 Y tyrosine            3.4         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   deltex 2 isoform a 
DTX2                  1.000   deltex 2 isoform a 
DTX2                  1.000   deltex 2 isoform a 
DTX2                  0.913   deltex 2 isoform b 
DTX1                  0.393   deltex homolog 1 
DTX4                  0.376   deltex 4 homolog 
DTX3L                 0.108   deltex 3-like 
DTX3                  0.099   deltex homolog 3 
EP300                 0.017   E1A binding protein p300 
ATN1                  0.015   atrophin-1 
ATN1                  0.015   atrophin-1 
LOC100132635          0.015   PREDICTED: similar to mucin 5, partial 
CREBBP                0.015   CREB binding protein isoform b 
CREBBP                0.015   CREB binding protein isoform a 
RGAG1                 0.015   retrotransposon gag domain containing 1 
FLJ22184              0.014   PREDICTED: hypothetical protein LOC80164 
SYNJ1                 0.013   synaptojanin 1 isoform c 
SYNJ1                 0.013   synaptojanin 1 isoform a 
SYNJ1                 0.013   synaptojanin 1 isoform b 
SYNJ1                 0.013   synaptojanin 1 isoform d 
NKX6-1                0.013   NK6 transcription factor related, locus 1 
HCN4                  0.013   hyperpolarization activated cyclic nucleotide-gated p...
ZFYVE28               0.013   zinc finger, FYVE domain containing 28 
CIC                   0.013   capicua homolog 
RAPH1                 0.013   Ras association and pleckstrin homology domains 1 is...
CITED4                0.013   Cbp/p300-interacting transactivator, with Glu/Asp-ri...
RNF32                 0.013   ring finger protein 32 
ZC3H3                 0.013   zinc finger CCCH-type containing 3 
FLJ22184              0.012   PREDICTED: hypothetical protein FLJ22184 
MAP1S                 0.012   BPY2 interacting protein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press