Guide to the Human Genome
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Name: ZFYVE28 Sequence: fasta or formatted (887aa) NCBI GI: 55741864
Description:

zinc finger, FYVE domain containing 28

Referenced in:

Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.8         96           2
 C cysteine            3.6         32           2
 D aspartate           6.7         59           2
 E glutamate           8.6         76           3
 F phenylalanine       3.2         28           2
 G glycine             6.9         61           2
 H histidine           2.5         22           2
 I isoleucine          2.8         25           2
 K lysine              3.8         34           1
 L leucine             9.2         82           2
 M methionine          2.4         21           2
 N asparagine          1.9         17           3
 P proline             7.0         62           3
 Q glutamine           3.8         34           2
 R arginine            6.5         58           2
 S serine              8.7         77           4
 T threonine           4.4         39           1
 V valine              4.7         42           2
 W tryptophan          0.7          6           1
 Y tyrosine            1.8         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger, FYVE domain containing 28 
MTMR3                 0.031   myotubularin-related protein 3 isoform c 
ZFYVE21               0.031   zinc finger, FYVE domain containing 21 
FGD2                  0.030   FYVE, RhoGEF and PH domain containing 2 
MTMR3                 0.030   myotubularin-related protein 3 isoform b 
RUFY1                 0.029   RUN and FYVE domain-containing 1 isoform b 
RUFY1                 0.029   RUN and FYVE domain-containing 1 isoform b 
RUFY1                 0.029   RUN and FYVE domain-containing 1 isoform a 
HGS                   0.028   hepatocyte growth factor-regulated tyrosine kinase su...
PIKFYVE               0.028   phosphatidylinositol-3-phosphate 5-kinase type III ...
FGD6                  0.027   FYVE, RhoGEF and PH domain containing 6 
RUFY2                 0.026   RUN and FYVE domain-containing 2 isoform a 
MTMR3                 0.025   myotubularin-related protein 3 isoform a 
WDFY3                 0.025   WD repeat and FYVE domain containing 3 isoform 3 [Ho...
WDFY3                 0.025   WD repeat and FYVE domain containing 3 isoform 1 [Ho...
MTMR4                 0.024   myotubularin related protein 4 
PLEKHF1               0.024   apoptosis-inducing protein D 
FGD4                  0.024   FYVE, RhoGEF and PH domain containing 4 
ZFYVE9                0.024   zinc finger, FYVE domain containing 9 isoform 1 [Hom...
ZFYVE9                0.024   zinc finger, FYVE domain containing 9 isoform 3 [Hom...
ZFYVE9                0.024   zinc finger, FYVE domain containing 9 isoform 2 [Homo...
EEA1                  0.023   early endosome antigen 1, 162kD 
ZFYVE1                0.023   zinc finger, FYVE domain containing 1 isoform 2 [Hom...
ZFYVE1                0.023   zinc finger, FYVE domain containing 1 isoform 1 [Hom...
PLEKHF2               0.023   phafin 2 
ZFYVE16               0.023   zinc finger, FYVE domain containing 16 
ZFYVE16               0.023   zinc finger, FYVE domain containing 16 
ANKFY1                0.022   ankyrin repeat and FYVE domain containing 1 isoform...
ZFYVE26               0.021   zinc finger, FYVE domain containing 26 
WDFY1                 0.018   WD repeat and FYVE domain containing 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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