Guide to the Human Genome
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Name: DTX3L Sequence: fasta or formatted (740aa) NCBI GI: 19923717
Description:

deltex 3-like

Referenced in:

Notch Pathway
Ring Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         37           2
 C cysteine            2.6         19           1
 D aspartate           4.5         33           2
 E glutamate           8.6         64           2
 F phenylalanine       4.5         33           1
 G glycine             5.5         41           3
 H histidine           3.0         22           2
 I isoleucine          5.7         42           1
 K lysine              9.7         72           2
 L leucine             8.0         59           3
 M methionine          2.2         16           2
 N asparagine          3.1         23           1
 P proline             5.4         40           2
 Q glutamine           5.4         40           2
 R arginine            4.2         31           2
 S serine              9.5         70           2
 T threonine           4.7         35           2
 V valine              5.3         39           1
 W tryptophan          0.1          1           1
 Y tyrosine            3.1         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   deltex 3-like 
DTX3                  0.133   deltex homolog 3 
DTX2                  0.094   deltex 2 isoform a 
DTX2                  0.094   deltex 2 isoform a 
DTX2                  0.094   deltex 2 isoform a 
DTX2                  0.091   deltex 2 isoform b 
DTX4                  0.085   deltex 4 homolog 
DTX1                  0.085   deltex homolog 1 
RAD18                 0.016   postreplication repair protein hRAD18p 
RING1                 0.015   ring finger protein 1 
TOPORS                0.015   topoisomerase I binding, arginine/serine-rich 
CHFR                  0.014   checkpoint with forkhead and ring finger domains is...
CHFR                  0.014   checkpoint with forkhead and ring finger domains is...
CHFR                  0.014   checkpoint with forkhead and ring finger domains is...
CHFR                  0.014   checkpoint with forkhead and ring finger domains is...
CHFR                  0.014   checkpoint with forkhead and ring finger domains is...
PARP14                0.014   poly (ADP-ribose) polymerase family, member 14 [Hom...
RFWD2                 0.014   ring finger and WD repeat domain 2 isoform a 
RFWD2                 0.014   ring finger and WD repeat domain 2 isoform d24 [Homo...
TRIM2                 0.014   tripartite motif-containing 2 isoform 1 
RNF2                  0.013   ring finger protein 2 
RBBP6                 0.013   retinoblastoma-binding protein 6 isoform 2 
RBBP6                 0.013   retinoblastoma-binding protein 6 isoform 1 
RNF220                0.013   ring finger protein 220 
RNF180                0.012   ring finger protein 180 isoform 1 
TRIM2                 0.010   tripartite motif-containing 2 isoform 2 
RNF38                 0.010   ring finger protein 38 isoform 2 
RNF38                 0.010   ring finger protein 38 isoform 2 
RNF38                 0.010   ring finger protein 38 isoform 3 
RNF38                 0.010   ring finger protein 38 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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