Guide to the Human Genome
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Name: DTX3 Sequence: fasta or formatted (347aa) NCBI GI: 30425428
Description:

deltex homolog 3

Referenced in:

Notch Pathway
Ring Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         23           2
 C cysteine            3.5         12           1
 D aspartate           2.9         10           2
 E glutamate           6.6         23           2
 F phenylalanine       2.6          9           1
 G glycine             9.5         33           4
 H histidine           2.0          7           2
 I isoleucine          3.5         12           1
 K lysine              5.8         20           2
 L leucine            11.0         38           3
 M methionine          2.0          7           1
 N asparagine          2.6          9           1
 P proline            11.8         41           6
 Q glutamine           4.3         15           1
 R arginine            6.6         23           1
 S serine              3.7         13           1
 T threonine           6.6         23           2
 V valine              4.9         17           1
 W tryptophan          0.6          2           1
 Y tyrosine            2.9         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   deltex homolog 3 
DTX3L                 0.278   deltex 3-like 
DTX2                  0.179   deltex 2 isoform a 
DTX2                  0.179   deltex 2 isoform a 
DTX2                  0.179   deltex 2 isoform a 
DTX2                  0.179   deltex 2 isoform b 
DTX4                  0.141   deltex 4 homolog 
DTX1                  0.135   deltex homolog 1 
SRPK2                 0.043   serine/arginine-rich protein-specific kinase 2 isofo...
SRPK2                 0.038   serine/arginine-rich protein-specific kinase 2 isofo...
DIAPH2                0.038   diaphanous 2 isoform 12C 
DIAPH2                0.038   diaphanous 2 isoform 156 
PCGF1                 0.036   polycomb group ring finger 1 
RNF39                 0.034   ring finger protein 39 isoform 1 
RNF39                 0.034   ring finger protein 39 isoform 2 
RING1                 0.034   ring finger protein 1 
PCGF2                 0.034   ring finger protein 110 
RNF2                  0.031   ring finger protein 2 
DVL2                  0.030   dishevelled 2 
BMI1                  0.030   BMI1 polycomb ring finger oncogene 
TOPORS                0.030   topoisomerase I binding, arginine/serine-rich 
LMOD2                 0.030   leiomodin 2 (cardiac) 
FMNL3                 0.030   formin-like 3 isoform 2 
FMNL3                 0.030   formin-like 3 isoform 1 
C6orf132              0.028   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.028   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.028   PREDICTED: hypothetical protein LOC647024 
CCNK                  0.028   cyclin K isoform 1 
RNF166                0.028   ring finger protein 166 
PCGF3                 0.028   ring finger protein 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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