Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: DTX4 Sequence: fasta or formatted (619aa) NCBI GI: 148237498
Description:

deltex 4 homolog

Referenced in:

Notch Pathway
Ring Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         37           2
 C cysteine            1.9         12           1
 D aspartate           3.6         22           1
 E glutamate           3.4         21           2
 F phenylalanine       1.1          7           1
 G glycine             8.6         53           2
 H histidine           2.7         17           2
 I isoleucine          5.0         31           2
 K lysine              5.8         36           2
 L leucine             7.9         49           3
 M methionine          2.3         14           1
 N asparagine          3.9         24           2
 P proline            10.7         66           3
 Q glutamine           4.0         25           1
 R arginine            5.7         35           3
 S serine              8.1         50           2
 T threonine           6.9         43           2
 V valine              7.8         48           3
 W tryptophan          1.6         10           1
 Y tyrosine            3.1         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   deltex 4 homolog 
DTX1                  0.626   deltex homolog 1 
DTX2                  0.381   deltex 2 isoform a 
DTX2                  0.381   deltex 2 isoform a 
DTX2                  0.381   deltex 2 isoform a 
DTX2                  0.347   deltex 2 isoform b 
DTX3L                 0.100   deltex 3-like 
DTX3                  0.079   deltex homolog 3 
GLTSCR1               0.016   glioma tumor suppressor candidate region gene 1 [Ho...
SRCAP                 0.016   Snf2-related CBP activator protein 
FLJ22184              0.015   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.015   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.015   PREDICTED: hypothetical protein LOC80164 
MLL4                  0.014   myeloid/lymphoid or mixed-lineage leukemia 4 
WIPF3                 0.014   WAS/WASL interacting protein family, member 3 [Homo...
CIC                   0.013   capicua homolog 
RNF32                 0.013   ring finger protein 32 
TAF4                  0.012   TBP-associated factor 4 
BRD2                  0.012   bromodomain containing 2 
BRD2                  0.012   bromodomain containing 2 
HLTF                  0.012   helicase-like transcription factor 
HLTF                  0.012   helicase-like transcription factor 
PCLO                  0.011   piccolo isoform 2 
PCLO                  0.011   piccolo isoform 1 
WIPF1                 0.011   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.011   WAS/WASL interacting protein family, member 1 
CREBBP                0.011   CREB binding protein isoform b 
CREBBP                0.011   CREB binding protein isoform a 
NACA                  0.011   nascent polypeptide-associated complex alpha subuni...
MUC5AC                0.010   mucin 5AC 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press