Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 156415984
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|156415984 tropomodulin 4 (muscle) [Homo sapiens]
(345 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|156415984 tropomodulin 4 (muscle) [Homo sapiens] 684 0.0
gi|4507553 tropomodulin 1 [Homo sapiens] 420 e-118
gi|7657649 tropomodulin 3 (ubiquitous) [Homo sapiens] 389 e-108
gi|7657647 neuronal tropomodulin isoform a [Homo sapiens] 380 e-105
gi|218931148 neuronal tropomodulin isoform b [Homo sapiens] 321 7e-88
gi|150378503 leiomodin 2 (cardiac) [Homo sapiens] 215 4e-56
gi|54607116 leiomodin 3 (fetal) [Homo sapiens] 182 5e-46
gi|112380630 leiomodin 1 (smooth muscle) [Homo sapiens] 136 2e-32
gi|118918429 NOD3 protein [Homo sapiens] 46 4e-05
gi|25777608 NLR family member X1 isoform 1 [Homo sapiens] 44 2e-04
gi|25777610 NLR family member X1 isoform 2 [Homo sapiens] 44 2e-04
gi|5174617 nucleotide-binding oligomerization domain containing ... 42 6e-04
gi|187608777 NF-kappa-B inhibitor-like protein 2 [Homo sapiens] 42 0.001
gi|11545912 nucleotide-binding oligomerization domain containing... 41 0.001
gi|23503285 leucine rich repeat containing 34 [Homo sapiens] 39 0.005
gi|194018482 NLR family, pyrin domain containing 4 [Homo sapiens] 38 0.015
gi|169213924 PREDICTED: leucine rich repeat containing 68 [Homo ... 37 0.034
gi|169214345 PREDICTED: leucine rich repeat containing 68 [Homo ... 37 0.034
gi|169213302 PREDICTED: leucine rich repeat containing 68 [Homo ... 37 0.034
gi|38569471 MUF1 protein [Homo sapiens] 36 0.044
gi|66392157 RGD motif, leucine rich repeats, tropomodulin domain... 35 0.098
gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo ... 35 0.098
gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo ... 35 0.098
gi|163965441 hypothetical protein LOC149499 [Homo sapiens] 35 0.098
gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo ... 35 0.098
gi|168986655 hypothetical protein LOC145497 [Homo sapiens] 35 0.13
gi|15149476 arginyl-tRNA synthetase [Homo sapiens] 34 0.17
gi|42822866 ribonuclease/angiogenin inhibitor [Homo sapiens] 33 0.29
gi|42822864 ribonuclease/angiogenin inhibitor [Homo sapiens] 33 0.29
gi|42822868 ribonuclease/angiogenin inhibitor [Homo sapiens] 33 0.29
>gi|156415984 tropomodulin 4 (muscle) [Homo sapiens]
Length = 345
Score = 684 bits (1765), Expect = 0.0
Identities = 345/345 (100%), Positives = 345/345 (100%)
Query: 1 MSSYQKELEKYRDIDEDEILRTLSPEELEQLDCELQEMDPENMLLPAGLRQRDQTKKSPT 60
MSSYQKELEKYRDIDEDEILRTLSPEELEQLDCELQEMDPENMLLPAGLRQRDQTKKSPT
Sbjct: 1 MSSYQKELEKYRDIDEDEILRTLSPEELEQLDCELQEMDPENMLLPAGLRQRDQTKKSPT 60
Query: 61 GPLDREALLQYLEQQALEVKERDDLVPFTGEKKGKPYIQPKREIPAEEQITLEPELEEAL 120
GPLDREALLQYLEQQALEVKERDDLVPFTGEKKGKPYIQPKREIPAEEQITLEPELEEAL
Sbjct: 61 GPLDREALLQYLEQQALEVKERDDLVPFTGEKKGKPYIQPKREIPAEEQITLEPELEEAL 120
Query: 121 AHATDAEMCDIAAILDMYTLMSNKQYYDALCSGEICNTEGISSVVQPDKYKPVPDEPPNP 180
AHATDAEMCDIAAILDMYTLMSNKQYYDALCSGEICNTEGISSVVQPDKYKPVPDEPPNP
Sbjct: 121 AHATDAEMCDIAAILDMYTLMSNKQYYDALCSGEICNTEGISSVVQPDKYKPVPDEPPNP 180
Query: 181 TNIEEILKRVRSNDKELEEVNLNNIQDIPIPMLSELCEAMKANTYVRSFSLVATRSGDPI 240
TNIEEILKRVRSNDKELEEVNLNNIQDIPIPMLSELCEAMKANTYVRSFSLVATRSGDPI
Sbjct: 181 TNIEEILKRVRSNDKELEEVNLNNIQDIPIPMLSELCEAMKANTYVRSFSLVATRSGDPI 240
Query: 241 ANAVADMLRENRSLQSLNIESNFISSTGLMAVLKAVRENATLTELRVDNQRQWPGDAVEM 300
ANAVADMLRENRSLQSLNIESNFISSTGLMAVLKAVRENATLTELRVDNQRQWPGDAVEM
Sbjct: 241 ANAVADMLRENRSLQSLNIESNFISSTGLMAVLKAVRENATLTELRVDNQRQWPGDAVEM 300
Query: 301 EMATVLEQCPSIVRFGYHFTQQGPRARAAQAMTRNNELRRQQKKR 345
EMATVLEQCPSIVRFGYHFTQQGPRARAAQAMTRNNELRRQQKKR
Sbjct: 301 EMATVLEQCPSIVRFGYHFTQQGPRARAAQAMTRNNELRRQQKKR 345
>gi|4507553 tropomodulin 1 [Homo sapiens]
Length = 359
Score = 420 bits (1080), Expect = e-118
Identities = 201/342 (58%), Positives = 277/342 (80%), Gaps = 1/342 (0%)
Query: 3 SYQKELEKYRDIDEDEILRTLSPEELEQLDCELQEMDPENMLLPAGLRQRDQTKKSPTGP 62
SY++ELEKYRD+DEDEIL L+ EEL L+ EL E+DP+N LLPAGLRQ+DQT K+PTGP
Sbjct: 2 SYRRELEKYRDLDEDEILGALTEEELRTLENELDELDPDNALLPAGLRQKDQTTKAPTGP 61
Query: 63 LDREALLQYLEQQALEVKERDDLVPFTGEKKGKPYIQPKREI-PAEEQITLEPELEEALA 121
RE LL +LE+QA E K+R+DLVP+TGEK+GK ++ ++ + P E +TLEPELEEALA
Sbjct: 62 FKREELLDHLEKQAKEFKDREDLVPYTGEKRGKVWVPKQKPLDPVLESVTLEPELEEALA 121
Query: 122 HATDAEMCDIAAILDMYTLMSNKQYYDALCSGEICNTEGISSVVQPDKYKPVPDEPPNPT 181
+A+DAE+CDIAAIL M+TLMSN+QYY AL S I N EG++SV++P +YKPVPDE PN T
Sbjct: 122 NASDAELCDIAAILGMHTLMSNQQYYQALSSSSIMNKEGLNSVIKPTQYKPVPDEEPNST 181
Query: 182 NIEEILKRVRSNDKELEEVNLNNIQDIPIPMLSELCEAMKANTYVRSFSLVATRSGDPIA 241
++EE L+R+++ND +LEEVNLNNI++IPIP L EA+K N+YV+ FS+V TRS DP+A
Sbjct: 182 DVEETLERIKNNDPKLEEVNLNNIRNIPIPTLKAYAEALKENSYVKKFSIVGTRSNDPVA 241
Query: 242 NAVADMLRENRSLQSLNIESNFISSTGLMAVLKAVRENATLTELRVDNQRQWPGDAVEME 301
A+A+ML+EN+ L++LN+ESNFIS G++ +++A+ N +L E+++DNQ Q G+ VEME
Sbjct: 242 YALAEMLKENKVLKTLNVESNFISGAGILRLVEALPYNTSLVEMKIDNQSQPLGNKVEME 301
Query: 302 MATVLEQCPSIVRFGYHFTQQGPRARAAQAMTRNNELRRQQK 343
+ ++LE+ ++++FGYHFTQQGPR RA+ AM NN+L R+++
Sbjct: 302 IVSMLEKNATLLKFGYHFTQQGPRLRASNAMMNNNDLVRKRR 343
>gi|7657649 tropomodulin 3 (ubiquitous) [Homo sapiens]
Length = 352
Score = 389 bits (999), Expect = e-108
Identities = 189/342 (55%), Positives = 266/342 (77%), Gaps = 2/342 (0%)
Query: 4 YQKELEKYRDIDEDEILRTLSPEELEQLDCELQEMDPENMLLPAGLRQRDQTKKSPTGPL 63
++K+LEKY+D+DEDE+L LS EL+QL+ L ++DPEN LLPAG RQ++QT KS TGP
Sbjct: 5 FRKDLEKYKDLDEDELLGNLSETELKQLETVLDDLDPENALLPAGFRQKNQTSKSTTGPF 64
Query: 64 DREALLQYLEQQALEVKERDDLVPFTGEKKGKPYIQPKREIPA--EEQITLEPELEEALA 121
DRE LL YLE++ALE K+R+D VP+TGEKKGK +I ++ + EE+++L+PELEEAL
Sbjct: 65 DREHLLSYLEKEALEHKDREDYVPYTGEKKGKIFIPKQKPVQTFTEEKVSLDPELEEALT 124
Query: 122 HATDAEMCDIAAILDMYTLMSNKQYYDALCSGEICNTEGISSVVQPDKYKPVPDEPPNPT 181
A+D E+CD+AAIL M+ L++N ++ + + S + E S+VV+ +K PV DEPPNPT
Sbjct: 125 SASDTELCDLAAILGMHNLITNTKFCNIMGSSNGVDQEHFSNVVKGEKILPVFDEPPNPT 184
Query: 182 NIEEILKRVRSNDKELEEVNLNNIQDIPIPMLSELCEAMKANTYVRSFSLVATRSGDPIA 241
N+EE LKR + ND L EVNLNNI++IPIP L + +A++ NT+V+ FSL ATRS DP+A
Sbjct: 185 NVEESLKRTKENDAHLVEVNLNNIKNIPIPTLKDFAKALETNTHVKCFSLAATRSNDPVA 244
Query: 242 NAVADMLRENRSLQSLNIESNFISSTGLMAVLKAVRENATLTELRVDNQRQWPGDAVEME 301
A A+ML+ N++L+SLN+ESNFI+ G++A++ A+R+N TL EL++DNQRQ G AVE+E
Sbjct: 245 TAFAEMLKVNKTLKSLNVESNFITGVGILALIDALRDNETLAELKIDNQRQQLGTAVELE 304
Query: 302 MATVLEQCPSIVRFGYHFTQQGPRARAAQAMTRNNELRRQQK 343
MA +LE+ +I++FGY FTQQGPR RAA A+T+NN+L R+++
Sbjct: 305 MAKMLEENTNILKFGYQFTQQGPRTRAANAITKNNDLVRKRR 346
>gi|7657647 neuronal tropomodulin isoform a [Homo sapiens]
Length = 351
Score = 380 bits (975), Expect = e-105
Identities = 189/346 (54%), Positives = 271/346 (78%), Gaps = 11/346 (3%)
Query: 4 YQKELEKYRDIDEDEILRTLSPEELEQLDCELQEMDPENMLLPAGLRQRDQTKKSPTGPL 63
+QKELEKY++IDEDE+L LS EEL+QL+ L ++DPE+ +LPAG RQ+DQT+K+ TGP
Sbjct: 5 FQKELEKYKNIDEDELLGKLSEEELKQLENVLDDLDPESAMLPAGFRQKDQTQKAATGPF 64
Query: 64 DREALLQYLEQQALEVKERDDLVPFTGEKKGKPYIQPKREIPA--EEQITLEPELEEALA 121
DRE LL YLE++ALE K+R+D VPFTGEKKG+ +I ++ I EE++TL+PELEEALA
Sbjct: 65 DREHLLMYLEKEALEQKDREDFVPFTGEKKGRVFIPKEKPIETRKEEKVTLDPELEEALA 124
Query: 122 HATDAEMCDIAAILDMYTLMSNKQYYDALCSGEICNTEG----ISSVVQPDKYKPVPDEP 177
A+D E+ D+AA+L ++ L++N ++ + E N +G + +VV+ +K KPV +EP
Sbjct: 125 SASDTELYDLAAVLGVHNLLNNPKFDE-----ETANNKGGKGPVRNVVKGEKVKPVFEEP 179
Query: 178 PNPTNIEEILKRVRSNDKELEEVNLNNIQDIPIPMLSELCEAMKANTYVRSFSLVATRSG 237
PNPTN+E L+++++ND L+EVNLNNI++IPIP L E +A++ NT+V+ FSL ATRS
Sbjct: 180 PNPTNVEISLQQMKANDPSLQEVNLNNIKNIPIPTLREFAKALETNTHVKKFSLAATRSN 239
Query: 238 DPIANAVADMLRENRSLQSLNIESNFISSTGLMAVLKAVRENATLTELRVDNQRQWPGDA 297
DP+A A ADML+ N++L SLNIESNFI+ TG++A+++A++EN TLTE+++DNQRQ G A
Sbjct: 240 DPVAIAFADMLKVNKTLTSLNIESNFITGTGILALVEALKENDTLTEIKIDNQRQQLGTA 299
Query: 298 VEMEMATVLEQCPSIVRFGYHFTQQGPRARAAQAMTRNNELRRQQK 343
VEME+A +LE+ I++FGY FT+QGPR R A A+T+NN+L R+++
Sbjct: 300 VEMEIAQMLEENSRILKFGYQFTKQGPRTRVAAAITKNNDLVRKKR 345
>gi|218931148 neuronal tropomodulin isoform b [Homo sapiens]
Length = 315
Score = 321 bits (822), Expect = 7e-88
Identities = 169/346 (48%), Positives = 244/346 (70%), Gaps = 47/346 (13%)
Query: 4 YQKELEKYRDIDEDEILRTLSPEELEQLDCELQEMDPENMLLPAGLRQRDQTKKSPTGPL 63
+QKELEKY++IDEDE+L LS EEL+QL+ L ++DPE+ +LPAG RQ+DQT+K+ TGP
Sbjct: 5 FQKELEKYKNIDEDELLGKLSEEELKQLENVLDDLDPESAMLPAGFRQKDQTQKAATGPF 64
Query: 64 DREALLQYLEQQALEVKERDDLVPFTGEKKGKPYIQPKREIPA--EEQITLEPELEEALA 121
DRE LL YLE++ALE K+R+D VPFTGEKKG+ +I ++ I EE++TL+PELEEALA
Sbjct: 65 DREHLLMYLEKEALEQKDREDFVPFTGEKKGRVFIPKEKPIETRKEEKVTLDPELEEALA 124
Query: 122 HATDAEMCDIAAILDMYTLMSNKQYYDALCSGEICNTEG----ISSVVQPDKYKPVPDEP 177
A+D E+ D+AA+L ++ L++N ++ + E N +G + +VV+ +K KPV +EP
Sbjct: 125 SASDTELYDLAAVLGVHNLLNNPKFDE-----ETANNKGGKGPVRNVVKGEKVKPVFEEP 179
Query: 178 PNPTNIEEILKRVRSNDKELEEVNLNNIQDIPIPMLSELCEAMKANTYVRSFSLVATRSG 237
PNPTN+E L+++++ND L+EVNLNNI+
Sbjct: 180 PNPTNVEISLQQMKANDPSLQEVNLNNIK------------------------------- 208
Query: 238 DPIANAVADMLRENRSLQSLNIESNFISSTGLMAVLKAVRENATLTELRVDNQRQWPGDA 297
A ADML+ N++L SLNIESNFI+ TG++A+++A++EN TLTE+++DNQRQ G A
Sbjct: 209 -----AFADMLKVNKTLTSLNIESNFITGTGILALVEALKENDTLTEIKIDNQRQQLGTA 263
Query: 298 VEMEMATVLEQCPSIVRFGYHFTQQGPRARAAQAMTRNNELRRQQK 343
VEME+A +LE+ I++FGY FT+QGPR R A A+T+NN+L R+++
Sbjct: 264 VEMEIAQMLEENSRILKFGYQFTKQGPRTRVAAAITKNNDLVRKKR 309
>gi|150378503 leiomodin 2 (cardiac) [Homo sapiens]
Length = 547
Score = 215 bits (548), Expect = 4e-56
Identities = 125/355 (35%), Positives = 205/355 (57%), Gaps = 16/355 (4%)
Query: 4 YQKELEKYRDIDEDEILRTLSPEELEQLDCELQEMDPENMLLPAGLRQRDQTKKSPTGPL 63
Y++ L KY IDEDE+L +LS EEL++L+ EL++++P+ L P GLRQ+ T+K+PTG
Sbjct: 6 YRRGLSKYESIDEDELLASLSAEELKELERELEDIEPDRNL-PVGLRQKSLTEKTPTGTF 64
Query: 64 DREALLQYLEQQALEVKERDDL-----VPFTGEKKGKPYIQPKREIPAEEQITLEPELEE 118
REAL+ Y E+++ ++ E++ L V E+ + I + E++ E E EE
Sbjct: 65 SREALMAYWEKESQKLLEKERLGECGKVAEDKEESEEELIFTESNSEVSEEVYTEEEEEE 124
Query: 119 ALAHATDAEMCDIAAILDMYTLMSNKQYYDALCS---------GEICNTEGISSVVQPDK 169
+ + + + ++ ++ YD++ S +I N + +
Sbjct: 125 SQEEEEEEDSDEEERTIETAKGINGTVNYDSVNSDNSKPKIFKSQIENINLTNGSNGRNT 184
Query: 170 YKPVPDEP-PNPTNIEEILKRVRSNDKELEEVNLNNIQDIPIPMLSELCEAMKANTYVRS 228
P P NPT IE+ L +++SND + EVNLNNI++I L+ EA+K NT V++
Sbjct: 185 ESPAAIHPCGNPTVIEDALDKIKSNDPDTTEVNLNNIENITTQTLTRFAEALKDNTVVKT 244
Query: 229 FSLVATRSGDPIANAVADMLRENRSLQSLNIESNFISSTGLMAVLKAVRENATLTELRVD 288
FSL T + D A A+A+ML+ N + ++N+ESNFI+ G++A+++A++ N LTELR
Sbjct: 245 FSLANTHADDSAAMAIAEMLKVNEHITNVNVESNFITGKGILAIMRALQHNTVLTELRFH 304
Query: 289 NQRQWPGDAVEMEMATVLEQCPSIVRFGYHFTQQGPRARAAQAMTRNNELRRQQK 343
NQR G VEME+ +L++ +++R GYHF GPR +TRN + +RQ++
Sbjct: 305 NQRHIMGSQVEMEIVKLLKENTTLLRLGYHFELPGPRMSMTSILTRNMDKQRQKR 359
>gi|54607116 leiomodin 3 (fetal) [Homo sapiens]
Length = 560
Score = 182 bits (461), Expect = 5e-46
Identities = 127/402 (31%), Positives = 197/402 (49%), Gaps = 65/402 (16%)
Query: 2 SSYQKELEKYRDIDEDEILRTLSPEELEQLDCELQEMDPENMLLPAGLRQRDQTKKSPTG 61
+S Q+EL +I+EDEIL LS EEL++L E++ M P+ L P G+ Q+DQT K PTG
Sbjct: 7 NSDQEELLD-EEINEDEILANLSAEELKELQSEMEVMAPDPSL-PVGMIQKDQTDKPPTG 64
Query: 62 PLDREALLQY----------LEQQALEV-----------------KERDDLVPFTGEKKG 94
+ ++L+ Y LE++ + V K ++ + EK
Sbjct: 65 NFNHKSLVDYMYWEKASRRMLEEERVPVTFVKSEEKTQEEHEEIEKRNKNMAQYLKEKLN 124
Query: 95 KPYIQPKREIPAEEQITLEPELEEALAHATDAEMCDIAAILDMYTLMSNKQYYDALCSGE 154
+ KRE I E +E D D D + + +
Sbjct: 125 NEIVANKRESKGSSNIQETDEEDEEEEDDDD----DDEGEDDGEESEETNREEEGKAKEQ 180
Query: 155 ICNTEGISSVVQPDKYKPVPDEPP--------------------------------NPTN 182
I N E V +K D P N T+
Sbjct: 181 IRNCENNCQQVTDKAFKEQRDRPEAQEQSEKKISKLDPKKLALDTSFLKVSTRPSGNQTD 240
Query: 183 IEEILKRVRSNDKELEEVNLNNIQDIPIPMLSELCEAMKANTYVRSFSLVATRSGDPIAN 242
++ L+RVR ND +++E+NLNNI++IP ML + AMK N ++++FSL + + +A
Sbjct: 241 LDGSLRRVRKNDPDMKELNLNNIENIPKEMLLDFVNAMKKNKHIKTFSLANVGADENVAF 300
Query: 243 AVADMLRENRSLQSLNIESNFISSTGLMAVLKAVRENATLTELRVDNQRQWPGDAVEMEM 302
A+A+MLRENRS+ +LNIESNFI+ G++A+++ ++ N TLTELR NQR G EME+
Sbjct: 301 ALANMLRENRSITTLNIESNFITGKGIVAIMRCLQFNETLTELRFHNQRHMLGHHAEMEI 360
Query: 303 ATVLEQCPSIVRFGYHFTQQGPRARAAQAMTRNNELRRQQKK 344
A +L+ ++++ GYHF GPR +TRN + +RQ+++
Sbjct: 361 ARLLKANNTLLKMGYHFELPGPRMVVTNLLTRNQDKQRQKRQ 402
>gi|112380630 leiomodin 1 (smooth muscle) [Homo sapiens]
Length = 600
Score = 136 bits (343), Expect = 2e-32
Identities = 70/182 (38%), Positives = 115/182 (63%)
Query: 162 SSVVQPDKYKPVPDEPPNPTNIEEILKRVRSNDKELEEVNLNNIQDIPIPMLSELCEAMK 221
S +P + +E P+ +E L+RV++ND E+ EVN+NN I +L EA++
Sbjct: 297 SGPTKPSEGPAKVEEEAAPSIFDEPLERVKNNDPEMTEVNVNNSDCITNEILVRFTEALE 356
Query: 222 ANTYVRSFSLVATRSGDPIANAVADMLRENRSLQSLNIESNFISSTGLMAVLKAVRENAT 281
NT V+ F+L TR+ D +A A+A ML+ N+++ SLN++SN I+ G++A+ +A+ +N T
Sbjct: 357 FNTVVKLFALANTRADDHVAFAIAIMLKANKTITSLNLDSNHITGKGILAIFRALLQNNT 416
Query: 282 LTELRVDNQRQWPGDAVEMEMATVLEQCPSIVRFGYHFTQQGPRARAAQAMTRNNELRRQ 341
LTELR NQR G EME+A +L++ ++++ GYHF GPR ++RN + +RQ
Sbjct: 417 LTELRFHNQRHICGGKTEMEIAKLLKENTTLLKLGYHFELAGPRMTVTNLLSRNMDKQRQ 476
Query: 342 QK 343
++
Sbjct: 477 KR 478
Score = 69.7 bits (169), Expect = 4e-12
Identities = 34/83 (40%), Positives = 59/83 (71%), Gaps = 3/83 (3%)
Query: 1 MSSYQKELEKYRDIDEDEILRTLSPEELEQLDCELQEMDPENMLLPAGLRQRDQTKKSPT 60
++ Y++++ + D D D +L TLSPEE+E+L+ EL +DP+ + P GLRQR+QT+K T
Sbjct: 4 VAKYRRQVSE--DPDIDSLLETLSPEEMEELEKELDVVDPDGSV-PVGLRQRNQTEKQST 60
Query: 61 GPLDREALLQYLEQQALEVKERD 83
G +REA+L + E++ ++ +R+
Sbjct: 61 GVYNREAMLNFCEKETKKLMQRE 83
>gi|118918429 NOD3 protein [Homo sapiens]
Length = 1065
Score = 46.2 bits (108), Expect = 4e-05
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 216 LCEAMKANTYVRSFSLVATRSGDPIANAVADMLRENRSLQSLNIESNFISSTGLMAVLKA 275
+ A+ AN+ +++ L A D A A+A +RENR+L SL+++ NFI + A+ +A
Sbjct: 854 IAHALCANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQA 913
Query: 276 VRENATLTELRVDNQRQWPGDAVEMEMATVLE 307
++ N +LT L D Q GD +A L+
Sbjct: 914 LQLNRSLTSL--DLQENAIGDDGACAVARALK 943
Score = 44.3 bits (103), Expect = 2e-04
Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 6/159 (3%)
Query: 183 IEEILKRVRSN-DKELEEVNLNNIQDIPIPMLSELCEAMKANTYVRSFSLVATRSGDPIA 241
+ E+L V S D +++++L Q I L ++ N + S L G A
Sbjct: 653 VMELLGSVLSGKDCRIQKISLAENQ-ISNKGAKALARSLLVNRSLTSLDLRGNSIGPQGA 711
Query: 242 NAVADMLRENRSLQSLNIESNFISSTGLMAVLKAVRENATLTELRVDNQRQWPGDAVEME 301
A+AD L+ NR+L SL+++ N + G ++ +A+ N TL+ L + Q+ G
Sbjct: 712 KALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLSMLHL--QKNSIGPMGAQR 769
Query: 302 MATVLEQCPSI--VRFGYHFTQQGPRARAAQAMTRNNEL 338
MA L+Q S+ + F + G A+A+ N L
Sbjct: 770 MADALKQNRSLKELMFSSNSIGDGGAKALAEALKVNQGL 808
Score = 43.1 bits (100), Expect = 4e-04
Identities = 33/123 (26%), Positives = 53/123 (43%)
Query: 216 LCEAMKANTYVRSFSLVATRSGDPIANAVADMLRENRSLQSLNIESNFISSTGLMAVLKA 275
L EA+K N + S L + D A+ L N++L SL++ N IS G A+ A
Sbjct: 798 LAEALKVNQGLESLDLQSNSISDAGVAALMGALCTNQTLLSLSLRENSISPEGAQAIAHA 857
Query: 276 VRENATLTELRVDNQRQWPGDAVEMEMATVLEQCPSIVRFGYHFTQQGPRARAAQAMTRN 335
+ N+TL L + A + +A + + + ++F Q G QA+ N
Sbjct: 858 LCANSTLKNLDLTANLLHDQGARAIAVAVRENRTLTSLHLQWNFIQAGAAQALGQALQLN 917
Query: 336 NEL 338
L
Sbjct: 918 RSL 920
Score = 42.7 bits (99), Expect = 5e-04
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 197 LEEVNL--NNIQDIPIPMLSELCEAMKANTYVRSFSLVATRSGDPIANAVADMLRENRSL 254
LE ++L N+I D + + L A+ N + S SL A A+A L N +L
Sbjct: 808 LESLDLQSNSISDAGV---AALMGALCTNQTLLSLSLRENSISPEGAQAIAHALCANSTL 864
Query: 255 QSLNIESNFISSTGLMAVLKAVRENATLTELRVDNQRQW 293
++L++ +N + G A+ AVREN TLT L + QW
Sbjct: 865 KNLDLTANLLHDQGARAIAVAVRENRTLTSLHL----QW 899
Score = 38.5 bits (88), Expect = 0.009
Identities = 23/70 (32%), Positives = 35/70 (50%)
Query: 216 LCEAMKANTYVRSFSLVATRSGDPIANAVADMLRENRSLQSLNIESNFISSTGLMAVLKA 275
+ EA+ +N + L G A +AD L++NRSL+ L SN I G A+ +A
Sbjct: 742 MAEALASNRTLSMLHLQKNSIGPMGAQRMADALKQNRSLKELMFSSNSIGDGGAKALAEA 801
Query: 276 VRENATLTEL 285
++ N L L
Sbjct: 802 LKVNQGLESL 811
Score = 36.6 bits (83), Expect = 0.034
Identities = 20/72 (27%), Positives = 36/72 (50%)
Query: 216 LCEAMKANTYVRSFSLVATRSGDPIANAVADMLRENRSLQSLNIESNFISSTGLMAVLKA 275
+ A+K NT + + L G A + + L NR+L+ L++ N I G A+ A
Sbjct: 938 VARALKVNTALTALYLQVASIGASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANA 997
Query: 276 VRENATLTELRV 287
++ N++L L +
Sbjct: 998 LKVNSSLRRLNL 1009
Score = 33.5 bits (75), Expect = 0.29
Identities = 20/72 (27%), Positives = 34/72 (47%)
Query: 216 LCEAMKANTYVRSFSLVATRSGDPIANAVADMLRENRSLQSLNIESNFISSTGLMAVLKA 275
L EA+ N + L G A A+A+ L+ N SL+ LN++ N + G + + A
Sbjct: 966 LGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLGMDGAICIATA 1025
Query: 276 VRENATLTELRV 287
+ N L + +
Sbjct: 1026 LSGNHRLQHINL 1037
Score = 31.6 bits (70), Expect = 1.1
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 216 LCEAMKANTYVRSFSLVATRSGDPIANAVADMLRENRSLQSLNIESNFISSTGLMAVLKA 275
L +A++ N + S L GD A AVA L+ N +L +L ++ I ++G + +A
Sbjct: 910 LGQALQLNRSLTSLDLQENAIGDDGACAVARALKVNTALTALYLQVASIGASGAQVLGEA 969
Query: 276 VRENATL 282
+ N TL
Sbjct: 970 LAVNRTL 976
>gi|25777608 NLR family member X1 isoform 1 [Homo sapiens]
Length = 975
Score = 43.9 bits (102), Expect = 2e-04
Identities = 26/72 (36%), Positives = 36/72 (50%)
Query: 216 LCEAMKANTYVRSFSLVATRSGDPIANAVADMLRENRSLQSLNIESNFISSTGLMAVLKA 275
L E + NT V SL+ T GD +A L NR LQ LN+ N T +A+ +A
Sbjct: 799 LMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARA 858
Query: 276 VRENATLTELRV 287
RE+ +L L +
Sbjct: 859 AREHPSLELLHL 870
Score = 28.5 bits (62), Expect = 9.2
Identities = 17/56 (30%), Positives = 29/56 (51%)
Query: 213 LSELCEAMKANTYVRSFSLVATRSGDPIANAVADMLRENRSLQSLNIESNFISSTG 268
L L + N ++ ++ +GD A A+A RE+ SL+ L++ N +SS G
Sbjct: 824 LELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEG 879
>gi|25777610 NLR family member X1 isoform 2 [Homo sapiens]
Length = 921
Score = 43.9 bits (102), Expect = 2e-04
Identities = 26/71 (36%), Positives = 36/71 (50%)
Query: 216 LCEAMKANTYVRSFSLVATRSGDPIANAVADMLRENRSLQSLNIESNFISSTGLMAVLKA 275
L E + NT V SL+ T GD +A L NR LQ LN+ N T +A+ +A
Sbjct: 799 LMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARA 858
Query: 276 VRENATLTELR 286
RE+ +L L+
Sbjct: 859 AREHPSLELLQ 869
>gi|5174617 nucleotide-binding oligomerization domain containing 1
[Homo sapiens]
Length = 953
Score = 42.4 bits (98), Expect = 6e-04
Identities = 27/100 (27%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 216 LCEAMKANTYVRSFSLVATRSGDPIANAVADMLRENRSLQSLNIESNFISSTGLMAVLKA 275
L A++ NT + L D +A ++A+ML+ N++L+ L + N I++ G + A
Sbjct: 860 LARALQQNTSLEILWLTQNELNDEVAESLAEMLKVNQTLKHLWLIQNQITAKGTAQLADA 919
Query: 276 VRENATLTELRVDNQRQWPGDAVEMEMATVLEQCPSIVRF 315
++ N +TE+ ++ G+ ++ E A V E I+ F
Sbjct: 920 LQSNTGITEICLN------GNLIKPEEAKVYEDEKRIICF 953
>gi|187608777 NF-kappa-B inhibitor-like protein 2 [Homo sapiens]
Length = 1378
Score = 41.6 bits (96), Expect = 0.001
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Query: 213 LSELCEAMKANTYVRSFSLVATRSGDPIANAVADMLRENRSLQSLNIESNFISSTGLMAV 272
L+ L A+K +T +R L R GD + L SL L++ SN + GL +
Sbjct: 1059 LTPLLRALKLHTALRELRLAGNRLGDKCVAELVAALGTMPSLALLDLSSNHLGPEGLRQL 1118
Query: 273 LKAVRENATLTEL-RVDNQRQWPGDAVEMEMATVLEQCP 310
+ ATL L +D GD +A++L CP
Sbjct: 1119 AMGLPGQATLQSLEELDLSMNPLGDGCGQSLASLLHACP 1157
>gi|11545912 nucleotide-binding oligomerization domain containing 2
[Homo sapiens]
Length = 1040
Score = 41.2 bits (95), Expect = 0.001
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 216 LCEAMKANTYVRSFSLVATRSGDPIANAVADMLRENRSLQSLNIESNFISSTGLMAVLKA 275
L E ++ NT ++ R GD A A+A+ L +++SL+ L++ N I S G A+
Sbjct: 891 LAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSVGAQALALM 950
Query: 276 VRENATLTEL 285
+ +N L EL
Sbjct: 951 LAKNVMLEEL 960
Score = 41.2 bits (95), Expect = 0.001
Identities = 23/74 (31%), Positives = 42/74 (56%)
Query: 216 LCEAMKANTYVRSFSLVATRSGDPIANAVADMLRENRSLQSLNIESNFISSTGLMAVLKA 275
L EA+ + +R SLV G A A+A ML +N L+ L +E N + G+ ++ +
Sbjct: 919 LAEALGDHQSLRWLSLVGNNIGSVGAQALALMLAKNVMLEELCLEENHLQDEGVCSLAEG 978
Query: 276 VRENATLTELRVDN 289
+++N++L L++ N
Sbjct: 979 LKKNSSLKILKLSN 992
>gi|23503285 leucine rich repeat containing 34 [Homo sapiens]
Length = 419
Score = 39.3 bits (90), Expect = 0.005
Identities = 22/73 (30%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 216 LCEAMKANTYVRSFSLVATRSGDPIANAVADMLRE-NRSLQSLNIESNFISSTGLMAVLK 274
L + +K+NT + L R + AN +++ L NRSL++L++ SN I GL+A+ +
Sbjct: 269 LADVLKSNTTLEVIDLSFNRIENAGANYLSETLTSHNRSLKALSVVSNNIEGEGLVALSQ 328
Query: 275 AVRENATLTELRV 287
+++ N T + + +
Sbjct: 329 SMKTNLTFSHIYI 341
>gi|194018482 NLR family, pyrin domain containing 4 [Homo sapiens]
Length = 994
Score = 37.7 bits (86), Expect = 0.015
Identities = 24/95 (25%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 185 EILKRVRSNDKELEEVNLN-NIQDIPIPMLSELCEAMKANTYVRSFSLVA-TRSGDPIAN 242
E+L + +N+K+L +N++ N D +P+L CEA+ + V + ++A +
Sbjct: 741 EVLAGLLTNNKKLTYLNVSCNQLDTGVPLL---CEALCSPDTVLVYLMLAFCHLSEQCCE 797
Query: 243 AVADMLRENRSLQSLNIESNFISSTGLMAVLKAVR 277
+++ML N+S++ L++ +N + GL + +A++
Sbjct: 798 YISEMLLRNKSVRYLDLSANVLKDEGLKTLCEALK 832
Score = 28.9 bits (63), Expect = 7.0
Identities = 30/142 (21%), Positives = 60/142 (42%), Gaps = 15/142 (10%)
Query: 184 EEILKRVRSNDK-ELEEVNLNNIQDIPIPMLSELCEAMKANTYVRSFSLVATRSG--DPI 240
E++ + SN ++ ++ N I D+ + +L C A+ +T R L G
Sbjct: 854 EDLASALISNQNLKILQIGCNEIGDVGVQLL---CRAL-THTDCRLEILGLEECGLTSTC 909
Query: 241 ANAVADMLRENRSLQSLNIESNFISSTGLMAVLKAVRE--------NATLTELRVDNQRQ 292
+A +L +++LQ LN+ N + TG++ + +A+R T+ + Q
Sbjct: 910 CKDLASVLTCSKTLQQLNLTLNTLDHTGVVVLCEALRHPECALQVLGLRKTDFDEETQAL 969
Query: 293 WPGDAVEMEMATVLEQCPSIVR 314
+ T+ + C +I R
Sbjct: 970 LTAEEERNPNLTITDDCDTITR 991
>gi|169213924 PREDICTED: leucine rich repeat containing 68 [Homo
sapiens]
Length = 625
Score = 36.6 bits (83), Expect = 0.034
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 195 KELEEVNLNNIQDIPIPMLSELCEAMKANTYVRSFSLVATRSGDPIANAVADMLRENRSL 254
+ LE +NL + I + L + +N V L +T+ A AVA+ + E+ L
Sbjct: 346 QSLETLNLGH-NPIGNEGVRHLKNGLISNRSVLRLGLASTKLTCEGAVAVAEFIAESPRL 404
Query: 255 QSLNIESNFISSTGLMAVLKAVRENATLTELRVDNQRQWPGDAVEMEMAT 304
L++ N I + GLMA+ A++ N +L LR+D R+ +AV+ + T
Sbjct: 405 LRLDLRENEIKTGGLMALSLALKVNHSL--LRLDLDREPKKEAVKSFIET 452
Score = 29.6 bits (65), Expect = 4.1
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 189 RVRSNDKELEEVNLNNIQDIPIPMLSELCEAMKANTYVRSFSLVATR-SGDPIANAVADM 247
R+RS+ L ++L N P++ L A+K N +R L + +G + + ++
Sbjct: 229 RIRSS---LAVLHLENASLSGRPLML-LATALKMNMNLRELYLADNKLNGLQDSAQLGNL 284
Query: 248 LRENRSLQSLNIESNFISSTGLMAVLKAVRE 278
L+ N SLQ L++ +N + +GL + + ++E
Sbjct: 285 LKFNCSLQILDLRNNHVLDSGLAYICEGLKE 315
Score = 29.3 bits (64), Expect = 5.4
Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 16/119 (13%)
Query: 183 IEEILKRVRSNDKELEEVNLN----------NIQDIPIPMLSELCEAMKANTYVR-SFSL 231
+EE+ KR++ +LE+ NL+ N+ L ++ E ++ T++ SF+
Sbjct: 127 LEEVFKRLQFKVVDLEQTNLDEDPRAEAEPPNLYAQGASALFDMIEYYESATHLNISFNK 186
Query: 232 -VATRSGDPIANAVADMLRENRSLQSLNIESNFISSTGLMAVLKAVRENATLTELRVDN 289
+ TR A A M+R+ LQ L+ + + V +A+R ++L L ++N
Sbjct: 187 HIGTRGW----QAAAHMMRKTSCLQYLDARNTPLLDHSAPFVARALRIRSSLAVLHLEN 241
>gi|169214345 PREDICTED: leucine rich repeat containing 68 [Homo
sapiens]
Length = 625
Score = 36.6 bits (83), Expect = 0.034
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 195 KELEEVNLNNIQDIPIPMLSELCEAMKANTYVRSFSLVATRSGDPIANAVADMLRENRSL 254
+ LE +NL + I + L + +N V L +T+ A AVA+ + E+ L
Sbjct: 346 QSLETLNLGH-NPIGNEGVRHLKNGLISNRSVLRLGLASTKLTCEGAVAVAEFIAESPRL 404
Query: 255 QSLNIESNFISSTGLMAVLKAVRENATLTELRVDNQRQWPGDAVEMEMAT 304
L++ N I + GLMA+ A++ N +L LR+D R+ +AV+ + T
Sbjct: 405 LRLDLRENEIKTGGLMALSLALKVNHSL--LRLDLDREPKKEAVKSFIET 452
Score = 29.6 bits (65), Expect = 4.1
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 189 RVRSNDKELEEVNLNNIQDIPIPMLSELCEAMKANTYVRSFSLVATR-SGDPIANAVADM 247
R+RS+ L ++L N P++ L A+K N +R L + +G + + ++
Sbjct: 229 RIRSS---LAVLHLENASLSGRPLML-LATALKMNMNLRELYLADNKLNGLQDSAQLGNL 284
Query: 248 LRENRSLQSLNIESNFISSTGLMAVLKAVRE 278
L+ N SLQ L++ +N + +GL + + ++E
Sbjct: 285 LKFNCSLQILDLRNNHVLDSGLAYICEGLKE 315
Score = 29.3 bits (64), Expect = 5.4
Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 16/119 (13%)
Query: 183 IEEILKRVRSNDKELEEVNLN----------NIQDIPIPMLSELCEAMKANTYVR-SFSL 231
+EE+ KR++ +LE+ NL+ N+ L ++ E ++ T++ SF+
Sbjct: 127 LEEVFKRLQFKVVDLEQTNLDEDPRAEAEPPNLYAQGASALFDMIEYYESATHLNISFNK 186
Query: 232 -VATRSGDPIANAVADMLRENRSLQSLNIESNFISSTGLMAVLKAVRENATLTELRVDN 289
+ TR A A M+R+ LQ L+ + + V +A+R ++L L ++N
Sbjct: 187 HIGTRGW----QAAAHMMRKTSCLQYLDARNTPLLDHSAPFVARALRIRSSLAVLHLEN 241
>gi|169213302 PREDICTED: leucine rich repeat containing 68 [Homo
sapiens]
Length = 625
Score = 36.6 bits (83), Expect = 0.034
Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 195 KELEEVNLNNIQDIPIPMLSELCEAMKANTYVRSFSLVATRSGDPIANAVADMLRENRSL 254
+ LE +NL + I + L + +N V L +T+ A AVA+ + E+ L
Sbjct: 346 QSLETLNLGH-NPIGNEGVRHLKNGLISNRSVLRLGLASTKLTCEGAVAVAEFIAESPRL 404
Query: 255 QSLNIESNFISSTGLMAVLKAVRENATLTELRVDNQRQWPGDAVEMEMAT 304
L++ N I + GLMA+ A++ N +L LR+D R+ +AV+ + T
Sbjct: 405 LRLDLRENEIKTGGLMALSLALKVNHSL--LRLDLDREPKKEAVKSFIET 452
Score = 29.6 bits (65), Expect = 4.1
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 189 RVRSNDKELEEVNLNNIQDIPIPMLSELCEAMKANTYVRSFSLVATR-SGDPIANAVADM 247
R+RS+ L ++L N P++ L A+K N +R L + +G + + ++
Sbjct: 229 RIRSS---LAVLHLENASLSGRPLML-LATALKMNMNLRELYLADNKLNGLQDSAQLGNL 284
Query: 248 LRENRSLQSLNIESNFISSTGLMAVLKAVRE 278
L+ N SLQ L++ +N + +GL + + ++E
Sbjct: 285 LKFNCSLQILDLRNNHVLDSGLAYICEGLKE 315
Score = 29.3 bits (64), Expect = 5.4
Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 16/119 (13%)
Query: 183 IEEILKRVRSNDKELEEVNLN----------NIQDIPIPMLSELCEAMKANTYVR-SFSL 231
+EE+ KR++ +LE+ NL+ N+ L ++ E ++ T++ SF+
Sbjct: 127 LEEVFKRLQFKVVDLEQTNLDEDPRAEAEPPNLYAQGASALFDMIEYYESATHLNISFNK 186
Query: 232 -VATRSGDPIANAVADMLRENRSLQSLNIESNFISSTGLMAVLKAVRENATLTELRVDN 289
+ TR A A M+R+ LQ L+ + + V +A+R ++L L ++N
Sbjct: 187 HIGTRGW----QAAAHMMRKTSCLQYLDARNTPLLDHSAPFVARALRIRSSLAVLHLEN 241
>gi|38569471 MUF1 protein [Homo sapiens]
Length = 812
Score = 36.2 bits (82), Expect = 0.044
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 209 PIPMLSELCEAMKANTYVRSFSLVATRSGDPIANAVADMLRE--NRSLQSLNIESNFISS 266
P L E+ AMK N+ ++ L R G+ A+AD+ E + SL L+I SN I
Sbjct: 687 PAQFLPEMVAAMKGNSTLKGLRLPGNRLGNAGLLALADVFSEDSSSSLCQLDISSNCIKP 746
Query: 267 TGLMAVLK 274
GL+ K
Sbjct: 747 DGLLEFAK 754
>gi|66392157 RGD motif, leucine rich repeats, tropomodulin domain
and proline-rich containing [Homo sapiens]
Length = 1435
Score = 35.0 bits (79), Expect = 0.098
Identities = 21/69 (30%), Positives = 35/69 (50%)
Query: 214 SELCEAMKANTYVRSFSLVATRSGDPIANAVADMLRENRSLQSLNIESNFISSTGLMAVL 273
S L A+ N + + + GD A +A LR N L+S+ + N S+ GL+ V
Sbjct: 599 SVLLRALATNPNLTALDISGNAMGDAGAKLLAKALRVNSRLRSVVWDRNHTSALGLLDVA 658
Query: 274 KAVRENATL 282
+A+ +N +L
Sbjct: 659 QALEQNHSL 667
>gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo
sapiens]
Length = 1135
Score = 35.0 bits (79), Expect = 0.098
Identities = 33/132 (25%), Positives = 55/132 (41%), Gaps = 22/132 (16%)
Query: 96 PYIQPKREIPAEEQITLEPELEEALAHATDAEMCDIAAILDMYTLMSNKQYYDALCSGEI 155
P I PKR+I + Q+ L+ +E A E+ + D+YT + + D+ S +
Sbjct: 539 PLISPKRQIRSRFQLNLDKTIESCKAQLGINEISE-----DVYTAVEHSDSEDSEKS-DS 592
Query: 156 CNTEGISSVVQPDKYKPVPDE----------------PPNPTNIEEILKRVRSNDKELEE 199
++E IS Q K +P E P PTN EI + ++S E+
Sbjct: 593 SDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPVEIKEELKSTSPASEK 652
Query: 200 VNLNNIQDIPIP 211
+ ++D P
Sbjct: 653 ADPGAVKDKASP 664
>gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo
sapiens]
Length = 1188
Score = 35.0 bits (79), Expect = 0.098
Identities = 33/132 (25%), Positives = 55/132 (41%), Gaps = 22/132 (16%)
Query: 96 PYIQPKREIPAEEQITLEPELEEALAHATDAEMCDIAAILDMYTLMSNKQYYDALCSGEI 155
P I PKR+I + Q+ L+ +E A E+ + D+YT + + D+ S +
Sbjct: 564 PLISPKRQIRSRFQLNLDKTIESCKAQLGINEISE-----DVYTAVEHSDSEDSEKS-DS 617
Query: 156 CNTEGISSVVQPDKYKPVPDE----------------PPNPTNIEEILKRVRSNDKELEE 199
++E IS Q K +P E P PTN EI + ++S E+
Sbjct: 618 SDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPVEIKEELKSTSPASEK 677
Query: 200 VNLNNIQDIPIP 211
+ ++D P
Sbjct: 678 ADPGAVKDKASP 689
>gi|163965441 hypothetical protein LOC149499 [Homo sapiens]
Length = 559
Score = 35.0 bits (79), Expect = 0.098
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 184 EEILKRVRSNDKELEEVNL--NNIQDIPIPMLSELCEAMKA-NTYVRSFSLVATRSGDPI 240
E+ ++ + D + ++L NNI D +L + + + N + S +L GD
Sbjct: 209 EQSYHKLMALDSTIAHLSLRNNNIDDRGAQLLGQALSTLHSCNRTLVSLNLGFNHIGDEG 268
Query: 241 ANAVADMLRENRSLQSLNIESNFISSTGLMAVLKAVR 277
A +AD LR NRSL L++ N I G + + + +R
Sbjct: 269 AGYIADGLRLNRSLLWLSLAHNRIQDKGALKLAEVLR 305
>gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo
sapiens]
Length = 1160
Score = 35.0 bits (79), Expect = 0.098
Identities = 33/132 (25%), Positives = 55/132 (41%), Gaps = 22/132 (16%)
Query: 96 PYIQPKREIPAEEQITLEPELEEALAHATDAEMCDIAAILDMYTLMSNKQYYDALCSGEI 155
P I PKR+I + Q+ L+ +E A E+ + D+YT + + D+ S +
Sbjct: 564 PLISPKRQIRSRFQLNLDKTIESCKAQLGINEISE-----DVYTAVEHSDSEDSEKS-DS 617
Query: 156 CNTEGISSVVQPDKYKPVPDE----------------PPNPTNIEEILKRVRSNDKELEE 199
++E IS Q K +P E P PTN EI + ++S E+
Sbjct: 618 SDSEYISDDEQKSKNEPEDTEDKEGCQMDKEPSAVKKKPKPTNPVEIKEELKSTSPASEK 677
Query: 200 VNLNNIQDIPIP 211
+ ++D P
Sbjct: 678 ADPGAVKDKASP 689
>gi|168986655 hypothetical protein LOC145497 [Homo sapiens]
Length = 488
Score = 34.7 bits (78), Expect = 0.13
Identities = 30/134 (22%), Positives = 53/134 (39%), Gaps = 10/134 (7%)
Query: 156 CNTEGISSVVQPDKYKPVPDEPPNPTNIEEILKRVRSNDKELEEVNLNNIQDIPIPMLSE 215
C E +V +K KP + IE+ K + KEL + +P+
Sbjct: 47 CEAESPPTV---EKVKPARENSETDLEIEDDEKFFTTGQKELYLEACKLMGVVPVSYFIR 103
Query: 216 LCEAMKANTYVRSFSLVATRSGDPIANAVADMLRENRSLQSLNIESNFISSTGLMAVLKA 275
E N T+ A+A L N ++ L +E N I G++++++
Sbjct: 104 NMEESYVNLNHHGLGPRGTK-------AIAIALVSNMAVTKLELEDNCIMEEGVLSLVEM 156
Query: 276 VRENATLTELRVDN 289
++EN L E+ + N
Sbjct: 157 LQENYYLQEMNISN 170
>gi|15149476 arginyl-tRNA synthetase [Homo sapiens]
Length = 660
Score = 34.3 bits (77), Expect = 0.17
Identities = 36/165 (21%), Positives = 73/165 (44%), Gaps = 27/165 (16%)
Query: 47 AGLRQRDQTKKSPTGPLDR---------EALLQYLEQQALEVKERDDLVPFTGEKKGKPY 97
A L Q+++ KS T +DR L+ L+++ L++K R +++ +
Sbjct: 10 ARLLQQEEEIKSLTAEIDRLKNCGCLGASPNLEQLQEENLKLKYRLNIL--------RKS 61
Query: 98 IQPKREIPAEEQITLEPELEEALAHATDAEMCDIAAILDMYTLMSNKQYYDALCSGEICN 157
+Q +R P + I + L+E HA A D+ + T ++ D C+ +
Sbjct: 62 LQAERNKPTKNMINIISRLQEVFGHAIKAAYPDLENPPLLVTPSQQAKFGDYQCNSAM-- 119
Query: 158 TEGISSVVQPDKYKPVPDEPPNPTNIEEILKRVRSNDKELEEVNL 202
GIS +++ + K NP I E + + +++ +E+V +
Sbjct: 120 --GISQMLKTKEQK------VNPREIAENITKHLPDNECIEKVEI 156
>gi|42822866 ribonuclease/angiogenin inhibitor [Homo sapiens]
Length = 461
Score = 33.5 bits (75), Expect = 0.29
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 3/101 (2%)
Query: 215 ELCEAMKANTYVRSFSLVATRSGDPIANAVADMLRE-NRSLQSLNIESNFISSTGLMAVL 273
+LC ++A ++ SL GD A + + L E L+SL ++S ++
Sbjct: 275 DLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 334
Query: 274 KAVRENATLTELRVDNQRQWPGDAVEMEMATVLEQCPSIVR 314
+ +N L EL++ N R DA E+ L Q S++R
Sbjct: 335 SVLAQNRFLLELQISNNRL--EDAGVRELCQGLGQPGSVLR 373
>gi|42822864 ribonuclease/angiogenin inhibitor [Homo sapiens]
Length = 461
Score = 33.5 bits (75), Expect = 0.29
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 3/101 (2%)
Query: 215 ELCEAMKANTYVRSFSLVATRSGDPIANAVADMLRE-NRSLQSLNIESNFISSTGLMAVL 273
+LC ++A ++ SL GD A + + L E L+SL ++S ++
Sbjct: 275 DLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 334
Query: 274 KAVRENATLTELRVDNQRQWPGDAVEMEMATVLEQCPSIVR 314
+ +N L EL++ N R DA E+ L Q S++R
Sbjct: 335 SVLAQNRFLLELQISNNRL--EDAGVRELCQGLGQPGSVLR 373
>gi|42822868 ribonuclease/angiogenin inhibitor [Homo sapiens]
Length = 461
Score = 33.5 bits (75), Expect = 0.29
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 3/101 (2%)
Query: 215 ELCEAMKANTYVRSFSLVATRSGDPIANAVADMLRE-NRSLQSLNIESNFISSTGLMAVL 273
+LC ++A ++ SL GD A + + L E L+SL ++S ++
Sbjct: 275 DLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 334
Query: 274 KAVRENATLTELRVDNQRQWPGDAVEMEMATVLEQCPSIVR 314
+ +N L EL++ N R DA E+ L Q S++R
Sbjct: 335 SVLAQNRFLLELQISNNRL--EDAGVRELCQGLGQPGSVLR 373
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.130 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,197,443
Number of Sequences: 37866
Number of extensions: 621462
Number of successful extensions: 2066
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 71
Number of HSP's that attempted gapping in prelim test: 1977
Number of HSP's gapped (non-prelim): 148
length of query: 345
length of database: 18,247,518
effective HSP length: 103
effective length of query: 242
effective length of database: 14,347,320
effective search space: 3472051440
effective search space used: 3472051440
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.