Guide to the Human Genome
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Name: RNH1 Sequence: fasta or formatted (461aa) NCBI GI: 42822864
Description:

ribonuclease/angiogenin inhibitor

Referenced in:

Leucine-rich Repeat Family
RNases and RNA Stability

Other entries for this name:
alt mRNA [461aa] ribonuclease/angiogenin inhibitor
alt mRNA [461aa] ribonuclease/angiogenin inhibitor
alt mRNA [461aa] ribonuclease/angiogenin inhibitor
alt mRNA [461aa] ribonuclease/angiogenin inhibitor
alt mRNA [461aa] ribonuclease/angiogenin inhibitor
alt mRNA [461aa] ribonuclease/angiogenin inhibitor
alt mRNA [461aa] ribonuclease/angiogenin inhibitor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         32           2
 C cysteine            6.9         32           2
 D aspartate           5.9         27           2
 E glutamate           7.6         35           2
 F phenylalanine       0.9          4           1
 G glycine             6.9         32           1
 H histidine           1.1          5           1
 I isoleucine          2.6         12           1
 K lysine              3.5         16           1
 L leucine            20.0         92           2
 M methionine          0.7          3           1
 N asparagine          3.7         17           2
 P proline             3.0         14           1
 Q glutamine           5.2         24           2
 R arginine            5.2         24           1
 S serine              9.8         45           2
 T threonine           2.8         13           1
 V valine              5.4         25           2
 W tryptophan          1.3          6           1
 Y tyrosine            0.7          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ribonuclease/angiogenin inhibitor 
RNH1                  1.000   ribonuclease/angiogenin inhibitor 
RNH1                  1.000   ribonuclease/angiogenin inhibitor 
RNH1                  1.000   ribonuclease/angiogenin inhibitor 
RNH1                  1.000   ribonuclease/angiogenin inhibitor 
RNH1                  1.000   ribonuclease/angiogenin inhibitor 
RNH1                  1.000   ribonuclease/angiogenin inhibitor 
RNH1                  1.000   ribonuclease/angiogenin inhibitor 
NLRP12                0.286   NLR family, pyrin domain containing 12 isoform 2 [Ho...
NLRP5                 0.235   NACHT, LRR and PYD containing protein 5 
NLRP14                0.232   NLR family, pyrin domain containing 14 
NLRP3                 0.222   NLR family, pyrin domain containing 3 isoform a [Ho...
NLRP3                 0.222   NLR family, pyrin domain containing 3 isoform a [Hom...
NLRP12                0.196   NLR family, pyrin domain containing 12 isoform 1 [Ho...
NLRP3                 0.194   NLR family, pyrin domain containing 3 isoform c [Ho...
NLRP9                 0.193   NLR family, pyrin domain containing 9 
NLRP11                0.188   NLR family, pyrin domain containing 11 
NLRP3                 0.184   NLR family, pyrin domain containing 3 isoform d [Ho...
NLRP4                 0.176   NLR family, pyrin domain containing 4 
NLRP2                 0.171   NLR family, pyrin domain containing 2 
NLRP13                0.166   NACHT, leucine rich repeat and PYD containing 13 [H...
NLRP8                 0.151   NLR family, pyrin domain containing 8 
NLRP3                 0.143   NLR family, pyrin domain containing 3 isoform b [Hom...
NLRP7                 0.133   NACHT, leucine rich repeat and PYD containing 7 iso...
NLRP7                 0.132   NACHT, leucine rich repeat and PYD containing 7 isof...
NLRP1                 0.129   NLR family, pyrin domain containing 1 isoform 2 [Homo...
NLRP1                 0.129   NLR family, pyrin domain containing 1 isoform 5 [Hom...
NLRP1                 0.129   NLR family, pyrin domain containing 1 isoform 1 [Hom...
NLRP1                 0.117   NLR family, pyrin domain containing 1 isoform 4 [Hom...
NLRP1                 0.117   NLR family, pyrin domain containing 1 isoform 3 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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