TMOD1 29583

Name: TMOD1	Sequence: fasta or formatted (359aa)		NCBI GI: 4507553
Description: tropomodulin 1		Referenced in: Cytoskeleton
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.7 24 2 C cysteine 0.6 2 1 D aspartate 5.6 20 1 E glutamate 11.1 40 3 F phenylalanine 1.7 6 1 G glycine 4.2 15 1 H histidine 0.8 3 1 I isoleucine 4.5 16 2 K lysine 8.1 29 2 L leucine 12.8 46 2 M methionine 2.8 10 2 N asparagine 7.2 26 3 P proline 6.1 22 1 Q glutamine 3.3 12 2 R arginine 5.0 18 2 S serine 5.6 20 4 T threonine 5.0 18 2 V valine 5.6 20 1 W tryptophan 0.3 1 1 Y tyrosine 3.1 11 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tropomodulin 1 TMOD3 0.595 tropomodulin 3 (ubiquitous) TMOD4 0.579 tropomodulin 4 (muscle) TMOD2 0.569 neuronal tropomodulin isoform a TMOD2 0.469 neuronal tropomodulin isoform b LMOD2 0.311 leiomodin 2 (cardiac) LMOD3 0.198 leiomodin 3 (fetal) LMOD1 0.192 leiomodin 1 (smooth muscle) NOD1 0.040 nucleotide-binding oligomerization domain containing ... NLRC3 0.040 NOD3 protein NOD2 0.038 nucleotide-binding oligomerization domain containing... TCTE1 0.025 t-complex-associated testis expressed 1 C14orf166B 0.022 hypothetical protein LOC145497 NES 0.018 nestin NFKBIL2 0.015 NF-kappa-B inhibitor-like protein 2 SLC35F5 0.015 solute carrier family 35, member F5 NLRC5 0.015 nucleotide-binding oligomerization domains 27 [Homo... KTN1 0.013 kinectin 1 isoform a KTN1 0.013 kinectin 1 isoform c KTN1 0.013 kinectin 1 isoform a SGOL2 0.012 shugoshin-like 2 isoform 2 SGOL2 0.012 shugoshin-like 2 isoform 1 SGOL2 0.012 shugoshin-like 2 isoform 3 LRRC34 0.012 leucine rich repeat containing 34 COLEC12 0.012 collectin sub-family member 12 DST 0.012 dystonin isoform 1e precursor KTN1 0.010 kinectin 1 isoform b MYH6 0.010 myosin heavy chain 6 LRRC16A 0.010 leucine rich repeat containing 16A GRIPAP1 0.010 GRIP1 associated protein 1 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.