Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: LRRC68 Sequence: fasta or formatted (625aa) NCBI GI: 169214345
Description:

PREDICTED: leucine rich repeat containing 68

Referenced in:

Leucine-rich Repeat Family

Other entries for this name:
alt mRNA [625aa] PREDICTED: leucine rich repeat containing 68
alt mRNA [625aa] PREDICTED: leucine rich repeat containing 68
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.3         58           3
 C cysteine            1.8         11           1
 D aspartate           5.4         34           2
 E glutamate          10.2         64           7
 F phenylalanine       1.9         12           1
 G glycine             6.6         41           2
 H histidine           2.2         14           1
 I isoleucine          2.9         18           1
 K lysine              5.1         32           2
 L leucine            13.9         87           3
 M methionine          1.8         11           2
 N asparagine          4.8         30           2
 P proline             8.0         50           3
 Q glutamine           4.3         27           1
 R arginine            5.1         32           1
 S serine              6.7         42           2
 T threonine           4.3         27           2
 V valine              3.8         24           2
 W tryptophan          0.5          3           1
 Y tyrosine            1.3          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: leucine rich repeat containing 68 
LRRC68                1.000   PREDICTED: leucine rich repeat containing 68 
LRRC68                1.000   PREDICTED: leucine rich repeat containing 68 
NLRC3                 0.064   NOD3 protein 
LRRC34                0.049   leucine rich repeat containing 34 
NLRP13                0.042   NACHT, leucine rich repeat and PYD containing 13 [H...
NOD1                  0.040   nucleotide-binding oligomerization domain containing ...
NLRP14                0.037   NLR family, pyrin domain containing 14 
RNH1                  0.037   ribonuclease/angiogenin inhibitor 
RNH1                  0.037   ribonuclease/angiogenin inhibitor 
RNH1                  0.037   ribonuclease/angiogenin inhibitor 
RNH1                  0.037   ribonuclease/angiogenin inhibitor 
RNH1                  0.037   ribonuclease/angiogenin inhibitor 
RNH1                  0.037   ribonuclease/angiogenin inhibitor 
RNH1                  0.037   ribonuclease/angiogenin inhibitor 
RNH1                  0.037   ribonuclease/angiogenin inhibitor 
C14orf166B            0.037   hypothetical protein LOC145497 
LRRC45                0.037   leucine rich repeat containing 45 
NLRP5                 0.036   NACHT, LRR and PYD containing protein 5 
NLRP3                 0.036   NLR family, pyrin domain containing 3 isoform c [Ho...
NLRC5                 0.036   nucleotide-binding oligomerization domains 27 [Homo...
C6orf154              0.034   hypothetical protein LOC221424 
NOD2                  0.033   nucleotide-binding oligomerization domain containing...
NLRP2                 0.033   NLR family, pyrin domain containing 2 
NLRP12                0.032   NLR family, pyrin domain containing 12 isoform 2 [Ho...
NLRP3                 0.031   NLR family, pyrin domain containing 3 isoform b [Hom...
RANGAP1               0.031   Ran GTPase activating protein 1 
NLRP9                 0.030   NLR family, pyrin domain containing 9 
NLRP7                 0.029   NACHT, leucine rich repeat and PYD containing 7 isof...
NLRP12                0.028   NLR family, pyrin domain containing 12 isoform 1 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press