RLTPR 34580

Name: RLTPR	Sequence: fasta or formatted (1435aa)		NCBI GI: 66392157
Description: RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing		Referenced in: Leucine-rich Repeat Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.8 140 3 C cysteine 1.9 27 2 D aspartate 5.1 73 3 E glutamate 6.7 96 3 F phenylalanine 2.3 33 2 G glycine 8.5 122 3 H histidine 2.3 33 3 I isoleucine 1.7 25 1 K lysine 2.4 35 2 L leucine 13.7 197 3 M methionine 1.4 20 2 N asparagine 2.1 30 2 P proline 9.0 129 3 Q glutamine 5.0 72 2 R arginine 8.5 122 2 S serine 8.8 126 3 T threonine 4.8 69 2 V valine 4.3 62 2 W tryptophan 1.0 14 1 Y tyrosine 0.7 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 RGD motif, leucine rich repeats, tropomodulin domain... LRRC16B 0.248 leucine rich repeat containing 16B LRRC16A 0.207 leucine rich repeat containing 16A NLRC3 0.029 NOD3 protein MLL2 0.019 myeloid/lymphoid or mixed-lineage leukemia 2 CASKIN2 0.014 cask-interacting protein 2 isoform b CASKIN2 0.014 cask-interacting protein 2 isoform a NACA 0.014 nascent polypeptide-associated complex alpha subuni... NLRP5 0.013 NACHT, LRR and PYD containing protein 5 FLJ22184 0.012 PREDICTED: hypothetical protein LOC80164 SRRM1 0.012 serine/arginine repetitive matrix 1 PRB2 0.012 proline-rich protein BstNI subfamily 2 KIAA1522 0.012 hypothetical protein LOC57648 PRR12 0.012 proline rich 12 NLRX1 0.011 NLR family member X1 isoform 1 NLRP3 0.011 NLR family, pyrin domain containing 3 isoform a [Ho... NLRP3 0.011 NLR family, pyrin domain containing 3 isoform a [Hom... NLRP3 0.011 NLR family, pyrin domain containing 3 isoform c [Ho... FLJ22184 0.011 PREDICTED: hypothetical protein FLJ22184 BAT2 0.011 HLA-B associated transcript-2 NLRP12 0.011 NLR family, pyrin domain containing 12 isoform 2 [Ho... NLRP3 0.010 NLR family, pyrin domain containing 3 isoform d [Ho... NLRP12 0.010 NLR family, pyrin domain containing 12 isoform 1 [Ho... MLL4 0.010 myeloid/lymphoid or mixed-lineage leukemia 4 C14orf166B 0.010 hypothetical protein LOC145497 FLJ22184 0.010 PREDICTED: hypothetical protein FLJ22184 RNH1 0.010 ribonuclease/angiogenin inhibitor RNH1 0.010 ribonuclease/angiogenin inhibitor RNH1 0.010 ribonuclease/angiogenin inhibitor RNH1 0.010 ribonuclease/angiogenin inhibitor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.