Guide to the Human Genome
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Name: RARS Sequence: fasta or formatted (660aa) NCBI GI: 15149476
Description:

arginyl-tRNA synthetase

Referenced in:

tRNA Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         43           3
 C cysteine            2.1         14           1
 D aspartate           6.8         45           2
 E glutamate           7.6         50           3
 F phenylalanine       4.5         30           1
 G glycine             5.6         37           2
 H histidine           1.8         12           1
 I isoleucine          7.0         46           2
 K lysine              8.3         55           3
 L leucine            10.8         71           2
 M methionine          2.6         17           1
 N asparagine          4.1         27           1
 P proline             3.0         20           2
 Q glutamine           4.5         30           2
 R arginine            5.3         35           1
 S serine              4.8         32           2
 T threonine           4.1         27           1
 V valine              6.4         42           2
 W tryptophan          0.8          5           1
 Y tyrosine            3.3         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   arginyl-tRNA synthetase 
RARS2                 0.139   arginyl-tRNA synthetase 2, mitochondrial precursor ...
UBQLN4                0.011   ataxin-1 ubiquitin-like interacting protein 
TARSL2                0.009   threonyl-tRNA synthetase-like 2 
UBQLN1                0.008   ubiquilin 1 isoform 2 
UBQLN1                0.008   ubiquilin 1 isoform 1 
TMOD4                 0.007   tropomodulin 4 (muscle) 
L1TD1                 0.006   LINE-1 type transposase domain containing 1 
CEP290                0.006   centrosomal protein 290kDa 
DICER1                0.006   dicer1 
DICER1                0.006   dicer1 
LUZP1                 0.006   leucine zipper protein 1 
LUZP1                 0.006   leucine zipper protein 1 
CLIP1                 0.005   restin isoform b 
CLIP1                 0.005   restin isoform a 
MYO5B                 0.005   myosin VB 
PATZ1                 0.005   POZ (BTB) and AT hook containing zinc finger 1 long ...
PATZ1                 0.005   POZ (BTB) and AT hook containing zinc finger 1 long ...
MAGI3                 0.005   membrane-associated guanylate kinase-related  3 iso...
CEP110                0.005   centrosomal protein 110kDa 
UBE3A                 0.005   ubiquitin protein ligase E3A isoform 3 
UBE3A                 0.005   ubiquitin protein ligase E3A isoform 1 
UBE3A                 0.005   ubiquitin protein ligase E3A isoform 2 
SMC1A                 0.005   structural maintenance of chromosomes 1A 
PPP1R12B              0.004   protein phosphatase 1, regulatory (inhibitor) subuni...
PPP1R12B              0.004   protein phosphatase 1, regulatory (inhibitor) subunit...
GCC1                  0.004   Golgi coiled-coil protein 1 
CCDC88C               0.004   DVL-binding protein DAPLE 
DCTN1                 0.004   dynactin 1 isoform 4 
DCTN1                 0.004   dynactin 1 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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